Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AL121776.1-201ENST00000429337 372 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.69□□□□□ -1.82
SSBP1Q04837 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.69□□□□□ -1.82
SSBP1Q04837 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.69□□□□□ -1.82
SSBP1Q04837 AL356390.1-201ENST00000455684 397 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 MTND4LP2-201ENST00000502312 285 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.69□□□□□ -1.82
SSBP1Q04837 BNIP3P41-201ENST00000503774 571 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.69□□□□□ -1.82
SSBP1Q04837 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.69□□□□□ -1.82
SSBP1Q04837 IGKV2-18-201ENST00000522607 343 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 AC013701.1-201ENST00000522657 465 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC3.69□□□□□ -1.82
SSBP1Q04837 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.69□□□□□ -1.82
SSBP1Q04837 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC3.69□□□□□ -1.82
SSBP1Q04837 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.69□□□□□ -1.82
SSBP1Q04837 OR11J2P-201ENST00000555298 907 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 AC020978.7-201ENST00000575953 1187 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 SNORD95-201ENST00000579879 68 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 AC025946.2-201ENST00000603398 234 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.69□□□□□ -1.82
SSBP1Q04837 AC128687.2-201ENST00000609657 566 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 AC006065.6-201ENST00000625201 545 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SSBP1Q04837 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.69□□□□□ -1.82
SSBP1Q04837 LINC01808-202ENST00000641680 1116 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SSBP1Q04837 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.69□□□□□ -1.82
SSBP1Q04837 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP1Q04837 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SSBP1Q04837 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.69□□□□□ -1.82
SSBP1Q04837 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SSBP1Q04837 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.69□□□□□ -1.82
SSBP1Q04837 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP1Q04837 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP1Q04837 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SSBP1Q04837 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
SSBP1Q04837 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSBP1Q04837 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
SSBP1Q04837 AC027287.1-201ENST00000553115 1453 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSBP1Q04837 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SSBP1Q04837 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSBP1Q04837 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.68□□□□□ -1.82
SSBP1Q04837 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
SSBP1Q04837 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SSBP1Q04837 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SSBP1Q04837 AC021146.4-201ENST00000309229 279 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.68□□□□□ -1.82
SSBP1Q04837 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSBP1Q04837 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.68□□□□□ -1.82
SSBP1Q04837 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.68□□□□□ -1.82
SSBP1Q04837 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.68□□□□□ -1.82
SSBP1Q04837 RNA5SP332-201ENST00000391063 115 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 SNORA17A-201ENST00000391185 133 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.68□□□□□ -1.82
SSBP1Q04837 RPS20P14-201ENST00000412545 360 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 NPM1P26-201ENST00000426339 738 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 RPS12P10-201ENST00000427031 377 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 RPL7P4-203ENST00000430239 730 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 LYPLA1P1-201ENST00000434514 622 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 RPL7P28-201ENST00000437739 740 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 AF228730.2-201ENST00000438784 848 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.68□□□□□ -1.82
SSBP1Q04837 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
SSBP1Q04837 AC109462.1-201ENST00000491087 368 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 AC104164.2-201ENST00000496953 495 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.68□□□□□ -1.82
SSBP1Q04837 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.68□□□□□ -1.82
SSBP1Q04837 RNA5SP362-201ENST00000516048 118 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 RNU2-30P-201ENST00000516209 141 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.68□□□□□ -1.82
SSBP1Q04837 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.68□□□□□ -1.82
SSBP1Q04837 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC3.68□□□□□ -1.82
SSBP1Q04837 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.68□□□□□ -1.82
SSBP1Q04837 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.68□□□□□ -1.82
SSBP1Q04837 AC006116.3-201ENST00000592968 361 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 AP000864.1-201ENST00000609424 650 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 AC009163.6-201ENST00000612367 342 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 REV3L-214ENST00000619481 969 ntTSL 5 BASIC3.68□□□□□ -1.82
SSBP1Q04837 AF117829.2-201ENST00000619538 361 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 SNORA17.5-201ENST00000630429 132 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.68□□□□□ -1.82
SSBP1Q04837 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SSBP1Q04837 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSBP1Q04837 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSBP1Q04837 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSBP1Q04837 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSBP1Q04837 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSBP1Q04837 AL627171.1-201ENST00000618845 1308 ntBASIC3.68□□□□□ -1.82
SSBP1Q04837 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SSBP1Q04837 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSBP1Q04837 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSBP1Q04837 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSBP1Q04837 AL133243.3-201ENST00000617415 3004 ntBASIC3.67□□□□□ -1.82
SSBP1Q04837 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SSBP1Q04837 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
SSBP1Q04837 RN7SKP162-201ENST00000363605 345 ntBASIC3.67□□□□□ -1.82
SSBP1Q04837 FIG4-202ENST00000368941 791 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms