Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN20P56880 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN20P56880 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN20P56880 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN20P56880 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CLDN20P56880 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN20P56880 AC083843.3-201ENST00000623679 2186 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 RNU6-249P-201ENST00000363016 102 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 RNU1-19P-201ENST00000363306 165 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 MIR142-201ENST00000384835 87 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 MTCO2P8-201ENST00000412213 658 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.73□□□□□ -1.65
CLDN20P56880 OR13Z1P-201ENST00000416141 834 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 MTCO3P4-201ENST00000419236 787 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 AC073310.1-201ENST00000423226 1033 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 DPY19L1P2-201ENST00000426647 915 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 AC093422.3-201ENST00000428506 305 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN20P56880 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN20P56880 MED6P1-201ENST00000439659 713 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN20P56880 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN20P56880 AL096803.2-201ENST00000450032 677 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 AL389915.2-201ENST00000454576 441 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN20P56880 AC079168.1-201ENST00000458741 345 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 RN7SL515P-201ENST00000463999 297 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 AC004815.1-201ENST00000484185 331 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 RPS12P31-201ENST00000491419 398 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 RN7SL591P-201ENST00000496150 292 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 NIFKP7-201ENST00000503365 834 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN20P56880 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.73□□□□□ -1.65
CLDN20P56880 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN20P56880 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN20P56880 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN20P56880 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN20P56880 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.73□□□□□ -1.65
CLDN20P56880 AC021451.1-201ENST00000523498 1129 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.73□□□□□ -1.65
CLDN20P56880 OR7E13P-201ENST00000526052 910 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN20P56880 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN20P56880 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.73□□□□□ -1.65
CLDN20P56880 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CLDN20P56880 SS18L2P2-201ENST00000583960 235 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CLDN20P56880 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN20P56880 AL606834.3-201ENST00000602615 496 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 AL669942.2-201ENST00000620352 697 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 AC145207.9-201ENST00000623802 325 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 AP001002.2-201ENST00000625137 386 ntBASIC4.73□□□□□ -1.65
CLDN20P56880 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN20P56880 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN20P56880 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN20P56880 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN20P56880 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN20P56880 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN20P56880 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN20P56880 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CLDN20P56880 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 MTCO1P15-201ENST00000529569 1526 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 VPS35P1-201ENST00000563400 1518 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.72□□□□□ -1.65
CLDN20P56880 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.72□□□□□ -1.65
CLDN20P56880 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 U3.3-201ENST00000362986 216 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 RNU6-298P-201ENST00000390888 96 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 SPTLC1P2-201ENST00000407089 121 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 RN7SKP126-201ENST00000411143 300 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.72□□□□□ -1.65
CLDN20P56880 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.72□□□□□ -1.65
CLDN20P56880 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDN20P56880 OR5M12P-201ENST00000423388 929 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 EI24P4-201ENST00000423683 1078 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.72□□□□□ -1.65
CLDN20P56880 AC005033.1-201ENST00000428904 813 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AC124944.2-201ENST00000429866 1242 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 MTCO1P52-201ENST00000433928 531 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AL627308.1-201ENST00000435693 821 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 RRM2P4-201ENST00000441721 562 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.72□□□□□ -1.65
CLDN20P56880 NOP56P2-201ENST00000447491 769 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.72□□□□□ -1.65
CLDN20P56880 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDN20P56880 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDN20P56880 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDN20P56880 RPL15P21-201ENST00000495592 567 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDN20P56880 HMGB3P16-201ENST00000508037 287 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 GTF2F2P1-201ENST00000511083 675 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms