Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MTND4P8-201ENST00000514997 1362 ntBASIC4.85□□□□□ -1.63
CDH12P55289 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH12P55289 AC006210.2-201ENST00000367074 1545 ntBASIC4.85□□□□□ -1.63
CDH12P55289 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH12P55289 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH12P55289 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH12P55289 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH12P55289 HSPA8P14-201ENST00000552265 1805 ntBASIC4.85□□□□□ -1.63
CDH12P55289 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CDH12P55289 CDC27P2-201ENST00000425026 1922 ntBASIC4.85□□□□□ -1.63
CDH12P55289 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH12P55289 AC107021.2-201ENST00000567714 2095 ntBASIC4.85□□□□□ -1.63
CDH12P55289 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH12P55289 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
CDH12P55289 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH12P55289 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH12P55289 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CDH12P55289 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH12P55289 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH12P55289 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH12P55289 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CDH12P55289 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH12P55289 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH12P55289 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH12P55289 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH12P55289 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH12P55289 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CDH12P55289 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CDH12P55289 MIR133B-201ENST00000362210 119 ntBASIC4.84□□□□□ -1.63
CDH12P55289 RNA5SP234-201ENST00000363916 119 ntBASIC4.84□□□□□ -1.63
CDH12P55289 RNU4-28P-201ENST00000364739 141 ntBASIC4.84□□□□□ -1.63
CDH12P55289 RNU4-31P-201ENST00000384211 141 ntBASIC4.84□□□□□ -1.63
CDH12P55289 MIR621-201ENST00000384919 96 ntBASIC4.84□□□□□ -1.63
CDH12P55289 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH12P55289 AL445213.1-201ENST00000412589 747 ntBASIC4.84□□□□□ -1.63
CDH12P55289 AC007738.1-201ENST00000413892 348 ntBASIC4.84□□□□□ -1.63
CDH12P55289 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH12P55289 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH12P55289 KCTD9P1-201ENST00000430462 1167 ntBASIC4.84□□□□□ -1.63
CDH12P55289 AC012075.1-201ENST00000436549 580 ntBASIC4.84□□□□□ -1.63
CDH12P55289 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH12P55289 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH12P55289 YWHAEP1-201ENST00000453697 763 ntBASIC4.84□□□□□ -1.63
CDH12P55289 AC244505.3-201ENST00000454598 187 ntBASIC4.84□□□□□ -1.63
CDH12P55289 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH12P55289 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH12P55289 AC008837.1-201ENST00000511513 412 ntBASIC4.84□□□□□ -1.63
CDH12P55289 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH12P55289 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH12P55289 UBTFL10-201ENST00000528532 562 ntBASIC4.84□□□□□ -1.63
CDH12P55289 YWHABP2-201ENST00000540201 713 ntBASIC4.84□□□□□ -1.63
CDH12P55289 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH12P55289 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH12P55289 AC009097.3-201ENST00000563557 1018 ntBASIC4.84□□□□□ -1.63
CDH12P55289 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH12P55289 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH12P55289 AC021755.4-201ENST00000616620 456 ntBASIC4.84□□□□□ -1.63
CDH12P55289 AC073869.10-201ENST00000642016 354 ntBASIC4.84□□□□□ -1.63
CDH12P55289 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH12P55289 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH12P55289 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CDH12P55289 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CDH12P55289 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.84□□□□□ -1.64
CDH12P55289 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.84□□□□□ -1.64
CDH12P55289 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH12P55289 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH12P55289 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH12P55289 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH12P55289 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CDH12P55289 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CDH12P55289 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH12P55289 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH12P55289 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CDH12P55289 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH12P55289 RNU6-452P-201ENST00000384406 107 ntBASIC4.83□□□□□ -1.64
CDH12P55289 RPL23AP59-201ENST00000399415 461 ntBASIC4.83□□□□□ -1.64
CDH12P55289 AL034374.1-201ENST00000406329 351 ntBASIC4.83□□□□□ -1.64
CDH12P55289 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH12P55289 AC246680.2-201ENST00000422106 389 ntBASIC4.83□□□□□ -1.64
CDH12P55289 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH12P55289 HMGB3P10-201ENST00000434734 572 ntBASIC4.83□□□□□ -1.64
CDH12P55289 GTF3AP5-201ENST00000442645 697 ntBASIC4.83□□□□□ -1.64
CDH12P55289 AC092685.1-201ENST00000447960 1243 ntBASIC4.83□□□□□ -1.64
CDH12P55289 RPL31P15-201ENST00000449770 338 ntBASIC4.83□□□□□ -1.64
CDH12P55289 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH12P55289 NPM1P19-201ENST00000450070 712 ntBASIC4.83□□□□□ -1.64
CDH12P55289 AC104634.1-201ENST00000452720 462 ntBASIC4.83□□□□□ -1.64
CDH12P55289 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH12P55289 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH12P55289 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH12P55289 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH12P55289 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH12P55289 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH12P55289 MRPS36P3-201ENST00000519284 130 ntBASIC4.83□□□□□ -1.64
CDH12P55289 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH12P55289 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH12P55289 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH12P55289 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH12P55289 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH12P55289 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms