Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NR1H2P55055 RN7SL591P-201ENST00000496150 292 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 NENFP3-201ENST00000503735 313 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.16□□□□□ -1.58
NR1H2P55055 PRELID3BP4-201ENST00000515476 571 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 AL671862.1-201ENST00000515851 349 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.16□□□□□ -1.58
NR1H2P55055 AC010376.1-201ENST00000522101 334 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.16□□□□□ -1.58
NR1H2P55055 AC007225.2-201ENST00000562529 256 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 AC010547.6-201ENST00000571789 193 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.16□□□□□ -1.58
NR1H2P55055 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.16□□□□□ -1.58
NR1H2P55055 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NR1H2P55055 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NR1H2P55055 AC011492.1-201ENST00000600023 315 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.16□□□□□ -1.58
NR1H2P55055 AL121652.1-201ENST00000608851 448 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 SDR42E1P1-201ENST00000611327 477 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 AL050303.3-201ENST00000613704 284 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 AC009318.3-201ENST00000616916 503 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 AC091046.2-201ENST00000620775 665 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 MIR6719-201ENST00000622428 87 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 AC073342.3-201ENST00000624211 193 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.16□□□□□ -1.58
NR1H2P55055 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NR1H2P55055 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.16□□□□□ -1.58
NR1H2P55055 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NR1H2P55055 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.16□□□□□ -1.58
NR1H2P55055 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
NR1H2P55055 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NR1H2P55055 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NR1H2P55055 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NR1H2P55055 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.16□□□□□ -1.58
NR1H2P55055 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NR1H2P55055 AC100757.1-201ENST00000616872 1835 ntBASIC5.16□□□□□ -1.58
NR1H2P55055 AC093535.2-201ENST00000624769 2326 ntBASIC5.15□□□□□ -1.58
NR1H2P55055 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NR1H2P55055 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NR1H2P55055 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
NR1H2P55055 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
NR1H2P55055 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
NR1H2P55055 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
NR1H2P55055 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.15□□□□□ -1.58
NR1H2P55055 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
NR1H2P55055 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NR1H2P55055 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.15□□□□□ -1.58
NR1H2P55055 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.15□□□□□ -1.58
NR1H2P55055 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NR1H2P55055 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NR1H2P55055 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.15□□□□□ -1.59
NR1H2P55055 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
NR1H2P55055 PPIAP9-201ENST00000403866 498 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 SNORA11C-201ENST00000408532 129 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 RNA5SP487-201ENST00000410186 122 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.15□□□□□ -1.59
NR1H2P55055 AC007738.1-201ENST00000413892 348 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 RPS4XP5-201ENST00000419038 768 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.15□□□□□ -1.59
NR1H2P55055 MTCYBP32-201ENST00000427945 1084 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 AL121776.1-201ENST00000429337 372 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 YWHAEP5-201ENST00000431545 765 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 RPS20P1-201ENST00000434853 354 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 AL445928.1-201ENST00000435545 222 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.15□□□□□ -1.59
NR1H2P55055 SUMO2P3-201ENST00000438311 288 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 AC023141.8-201ENST00000442554 208 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.15□□□□□ -1.59
NR1H2P55055 AL606517.1-201ENST00000446914 387 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 EEF1A1P1-201ENST00000447052 739 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 IGBP1P3-201ENST00000447449 1000 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 AL050341.1-201ENST00000447743 313 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 RANP1-206ENST00000455094 651 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.15□□□□□ -1.59
NR1H2P55055 AL591473.1-201ENST00000464297 313 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 GTF2IP9-201ENST00000502460 301 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 AC021106.1-201ENST00000509020 1058 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.15□□□□□ -1.59
NR1H2P55055 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
NR1H2P55055 ATP5LP3-201ENST00000514223 304 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 RN7SKP253-201ENST00000516424 309 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 RN7SKP283-201ENST00000517197 270 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 CDC42P3-201ENST00000518493 633 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.15□□□□□ -1.59
NR1H2P55055 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.15□□□□□ -1.59
NR1H2P55055 HMGN2P36-201ENST00000529541 409 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NR1H2P55055 IGBP1P1-201ENST00000554337 1009 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.15□□□□□ -1.59
NR1H2P55055 AC022404.1-201ENST00000555320 273 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.15□□□□□ -1.59
NR1H2P55055 AC023825.1-201ENST00000566704 1030 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 GARSP1-201ENST00000570895 719 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NR1H2P55055 MIR4260-201ENST00000583107 67 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 AC110743.1-201ENST00000584870 478 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 AC023762.1-201ENST00000603280 584 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 AC099785.1-201ENST00000605697 437 ntBASIC5.15□□□□□ -1.59
NR1H2P55055 AL021707.7-201ENST00000607991 416 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms