Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATN1P54259 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ATN1P54259 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC8.54□□□□□ -1.04
ATN1P54259 ABCA11P-201ENST00000451020 1815 ntTSL 2 BASIC8.54□□□□□ -1.04
ATN1P54259 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
ATN1P54259 AC025125.1-201ENST00000624743 1922 ntBASIC8.54□□□□□ -1.04
ATN1P54259 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
ATN1P54259 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC8.54□□□□□ -1.04
ATN1P54259 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATN1P54259 R3HDM2P1-201ENST00000505381 1960 ntBASIC8.54□□□□□ -1.04
ATN1P54259 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATN1P54259 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATN1P54259 RBMX2P2-201ENST00000257020 946 ntBASIC8.54□□□□□ -1.04
ATN1P54259 RPL24P4-201ENST00000326586 421 ntBASIC8.54□□□□□ -1.04
ATN1P54259 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
ATN1P54259 Y_RNA.126-201ENST00000363382 111 ntBASIC8.54□□□□□ -1.04
ATN1P54259 Y_RNA.314-201ENST00000365114 102 ntBASIC8.54□□□□□ -1.04
ATN1P54259 Y_RNA.353-201ENST00000365440 108 ntBASIC8.54□□□□□ -1.04
ATN1P54259 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
ATN1P54259 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC8.54□□□□□ -1.04
ATN1P54259 Y_RNA.526-201ENST00000384572 110 ntBASIC8.54□□□□□ -1.04
ATN1P54259 POLHP1-201ENST00000411806 470 ntBASIC8.54□□□□□ -1.04
ATN1P54259 CYP4F34P-201ENST00000425951 481 ntBASIC8.54□□□□□ -1.04
ATN1P54259 RPL21P112-201ENST00000434403 463 ntBASIC8.54□□□□□ -1.04
ATN1P54259 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC8.54□□□□□ -1.04
ATN1P54259 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC8.54□□□□□ -1.04
ATN1P54259 AC005297.2-201ENST00000450430 606 ntBASIC8.54□□□□□ -1.04
ATN1P54259 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC8.54□□□□□ -1.04
ATN1P54259 RN7SL267P-201ENST00000485107 261 ntBASIC8.54□□□□□ -1.04
ATN1P54259 RPS24P16-201ENST00000497294 392 ntBASIC8.54□□□□□ -1.04
ATN1P54259 YWHAEP4-201ENST00000505390 198 ntBASIC8.54□□□□□ -1.04
ATN1P54259 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC8.54□□□□□ -1.04
ATN1P54259 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC8.54□□□□□ -1.04
ATN1P54259 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC8.54□□□□□ -1.04
ATN1P54259 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC8.54□□□□□ -1.04
ATN1P54259 RNA5SP384-201ENST00000516615 116 ntBASIC8.54□□□□□ -1.04
ATN1P54259 RNU6-897P-201ENST00000517135 105 ntBASIC8.54□□□□□ -1.04
ATN1P54259 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC8.54□□□□□ -1.04
ATN1P54259 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC8.54□□□□□ -1.04
ATN1P54259 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC8.54□□□□□ -1.04
ATN1P54259 OR11H5P-201ENST00000554039 926 ntBASIC8.54□□□□□ -1.04
ATN1P54259 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC8.54□□□□□ -1.04
ATN1P54259 SUB1P3-201ENST00000564581 315 ntBASIC8.54□□□□□ -1.04
ATN1P54259 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ATN1P54259 AC090517.1-201ENST00000569307 266 ntBASIC8.54□□□□□ -1.04
ATN1P54259 RN7SL778P-201ENST00000607160 297 ntBASIC8.54□□□□□ -1.04
ATN1P54259 AL008726.1-201ENST00000607703 569 ntTSL 4 BASIC8.54□□□□□ -1.04
ATN1P54259 AC000068.3-201ENST00000607934 427 ntBASIC8.54□□□□□ -1.04
ATN1P54259 AC005520.5-201ENST00000613926 164 ntBASIC8.54□□□□□ -1.04
ATN1P54259 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
ATN1P54259 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATN1P54259 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATN1P54259 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATN1P54259 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATN1P54259 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.54□□□□□ -1.04
ATN1P54259 AC005034.3-201ENST00000604845 1747 ntBASIC8.54□□□□□ -1.04
ATN1P54259 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATN1P54259 AC079178.2-201ENST00000439323 1624 ntBASIC8.54□□□□□ -1.04
ATN1P54259 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC8.54□□□□□ -1.04
ATN1P54259 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC8.54□□□□□ -1.04
ATN1P54259 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
ATN1P54259 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ATN1P54259 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATN1P54259 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
ATN1P54259 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATN1P54259 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
ATN1P54259 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.53□□□□□ -1.04
ATN1P54259 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC8.53□□□□□ -1.04
ATN1P54259 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
ATN1P54259 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC8.53□□□□□ -1.04
ATN1P54259 AL391987.6-201ENST00000305671 199 ntBASIC8.53□□□□□ -1.04
ATN1P54259 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
ATN1P54259 MIR411-201ENST00000362239 96 ntBASIC8.53□□□□□ -1.04
ATN1P54259 Y_RNA.199-201ENST00000364014 102 ntBASIC8.53□□□□□ -1.04
ATN1P54259 RNU6-98P-201ENST00000384173 107 ntBASIC8.53□□□□□ -1.04
ATN1P54259 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
ATN1P54259 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 RNU6-1203P-201ENST00000410703 110 ntBASIC8.53□□□□□ -1.04
ATN1P54259 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC8.53□□□□□ -1.04
ATN1P54259 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.53□□□□□ -1.04
ATN1P54259 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC8.53□□□□□ -1.04
ATN1P54259 MTATP6P16-201ENST00000434543 526 ntBASIC8.53□□□□□ -1.04
ATN1P54259 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC8.53□□□□□ -1.04
ATN1P54259 AL356121.1-201ENST00000442911 156 ntBASIC8.53□□□□□ -1.04
ATN1P54259 AC004980.3-201ENST00000447046 365 ntBASIC8.53□□□□□ -1.04
ATN1P54259 AL118520.1-201ENST00000450770 291 ntBASIC8.53□□□□□ -1.04
ATN1P54259 AL162388.1-201ENST00000450912 352 ntBASIC8.53□□□□□ -1.04
ATN1P54259 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC8.53□□□□□ -1.04
ATN1P54259 AC022080.2-201ENST00000452932 533 ntBASIC8.53□□□□□ -1.04
ATN1P54259 AC091021.1-201ENST00000468051 388 ntBASIC8.53□□□□□ -1.04
ATN1P54259 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC8.53□□□□□ -1.04
ATN1P54259 TRBV8-2-201ENST00000475637 270 ntBASIC8.53□□□□□ -1.04
ATN1P54259 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 AL445187.1-201ENST00000502685 260 ntBASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms