Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 PLP1-221ENST00000619236 2896 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
NUBP1P53384 MIR551B-201ENST00000384984 96 ntBASIC8.19□□□□□ -1.1
NUBP1P53384 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
NUBP1P53384 RNU6-130P-201ENST00000411112 103 ntBASIC8.19□□□□□ -1.1
NUBP1P53384 AC130360.1-201ENST00000425489 1117 ntBASIC8.19□□□□□ -1.1
NUBP1P53384 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.19□□□□□ -1.1
NUBP1P53384 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC8.19□□□□□ -1.1
NUBP1P53384 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC8.19□□□□□ -1.1
NUBP1P53384 RPL23AP64-201ENST00000469465 435 ntBASIC8.19□□□□□ -1.1
NUBP1P53384 RN7SL836P-201ENST00000476140 296 ntBASIC8.19□□□□□ -1.1
NUBP1P53384 RPL31P60-201ENST00000478450 367 ntBASIC8.19□□□□□ -1.1
NUBP1P53384 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC8.19□□□□□ -1.1
NUBP1P53384 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.19□□□□□ -1.1
NUBP1P53384 OR10G5P-201ENST00000532733 358 ntBASIC8.19□□□□□ -1.1
NUBP1P53384 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC8.19□□□□□ -1.1
NUBP1P53384 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC8.19□□□□□ -1.1
NUBP1P53384 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC8.19□□□□□ -1.1
NUBP1P53384 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.19□□□□□ -1.1
NUBP1P53384 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC8.19□□□□□ -1.1
NUBP1P53384 AL589994.2-201ENST00000621124 579 ntBASIC8.19□□□□□ -1.1
NUBP1P53384 MIR6813-201ENST00000621638 56 ntBASIC8.19□□□□□ -1.1
NUBP1P53384 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC8.19□□□□□ -1.1
NUBP1P53384 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
NUBP1P53384 PAPPA2-201ENST00000367661 4369 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 CYB561A3-221ENST00000546151 3986 ntTSL 3 BASIC8.19□□□□□ -1.1
NUBP1P53384 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 ZNF259P1-202ENST00000572422 4912 ntBASIC8.19□□□□□ -1.1
NUBP1P53384 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 ABI1-201ENST00000346832 3289 ntTSL 2 BASIC8.19□□□□□ -1.1
NUBP1P53384 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC8.19□□□□□ -1.1
NUBP1P53384 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC8.19□□□□□ -1.1
NUBP1P53384 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 SLFN12-206ENST00000452764 2423 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
NUBP1P53384 SS18-203ENST00000415083 3414 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 AGBL3-203ENST00000436302 3533 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
NUBP1P53384 HNRNPA1L2-201ENST00000357495 3011 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
NUBP1P53384 AL137003.2-201ENST00000606924 2538 ntBASIC8.19□□□□□ -1.1
NUBP1P53384 ACSL6-212ENST00000431707 2060 ntTSL 5 BASIC8.18□□□□□ -1.1
NUBP1P53384 LINC00898-201ENST00000380990 4185 ntTSL 2 BASIC8.18□□□□□ -1.1
NUBP1P53384 OR5M2P-202ENST00000641241 4242 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC8.18□□□□□ -1.1
NUBP1P53384 NAA16-201ENST00000379406 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 IRF5P1-201ENST00000504852 2164 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC8.18□□□□□ -1.1
NUBP1P53384 TRPV1-203ENST00000399759 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 SNX19P2-201ENST00000452841 2971 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
NUBP1P53384 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 ZNF184-201ENST00000211936 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC8.18□□□□□ -1.1
NUBP1P53384 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
NUBP1P53384 RNU6-858P-201ENST00000362436 107 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 RFX3-203ENST00000381984 364 ntTSL 3 BASIC8.18□□□□□ -1.1
NUBP1P53384 SNORD15A-201ENST00000384214 148 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 AGBL5-IT1-201ENST00000411862 339 ntTSL 3 BASIC8.18□□□□□ -1.1
NUBP1P53384 ATP5HP4-201ENST00000414313 475 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 AC007098.1-201ENST00000420122 367 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 AL136529.1-201ENST00000430540 610 ntTSL 3 BASIC8.18□□□□□ -1.1
NUBP1P53384 RPL12P15-201ENST00000433385 499 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 RPL7L1P11-201ENST00000446092 721 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 AC239798.1-201ENST00000449024 1176 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 AP000797.2-201ENST00000475768 606 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 AC092349.1-201ENST00000504903 310 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 RNU6-479P-201ENST00000516348 105 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 AF186190.1-201ENST00000517470 480 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 AC069113.1-201ENST00000517763 267 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC8.18□□□□□ -1.1
NUBP1P53384 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC8.18□□□□□ -1.1
NUBP1P53384 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC8.18□□□□□ -1.1
NUBP1P53384 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC8.18□□□□□ -1.1
NUBP1P53384 GLYATL1P2-202ENST00000588046 902 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 AC243654.2-201ENST00000612843 443 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 AP001784.1-201ENST00000624107 428 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC8.18□□□□□ -1.1
NUBP1P53384 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC8.18□□□□□ -1.1
NUBP1P53384 SIDT2-203ENST00000431081 3910 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 AC005183.1-201ENST00000603687 1979 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.18□□□□□ -1.1
NUBP1P53384 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 AC093768.1-201ENST00000505987 2173 ntBASIC8.18□□□□□ -1.1
NUBP1P53384 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 ERCC5-202ENST00000375954 2986 ntTSL 5 BASIC8.18□□□□□ -1.1
NUBP1P53384 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC8.18□□□□□ -1.1
NUBP1P53384 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC8.18□□□□□ -1.1
NUBP1P53384 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC8.18□□□□□ -1.1
NUBP1P53384 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms