Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MRE11P49959 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.36□□□□□ -1.39
MRE11P49959 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.36□□□□□ -1.39
MRE11P49959 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
MRE11P49959 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.36□□□□□ -1.39
MRE11P49959 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.36□□□□□ -1.39
MRE11P49959 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MRE11P49959 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MRE11P49959 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
MRE11P49959 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
MRE11P49959 FAP-203ENST00000443424 2598 ntTSL 2 BASIC6.35□□□□□ -1.39
MRE11P49959 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.35□□□□□ -1.39
MRE11P49959 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
MRE11P49959 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
MRE11P49959 PABPC1P6-201ENST00000445594 1829 ntBASIC6.35□□□□□ -1.39
MRE11P49959 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
MRE11P49959 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
MRE11P49959 RNU6-796P-201ENST00000391086 107 ntBASIC6.35□□□□□ -1.39
MRE11P49959 TATDN1P1-201ENST00000414123 891 ntBASIC6.35□□□□□ -1.39
MRE11P49959 AL445183.3-201ENST00000414168 502 ntBASIC6.35□□□□□ -1.39
MRE11P49959 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.35□□□□□ -1.39
MRE11P49959 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.35□□□□□ -1.39
MRE11P49959 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.35□□□□□ -1.39
MRE11P49959 BX323845.3-201ENST00000428215 527 ntBASIC6.35□□□□□ -1.39
MRE11P49959 KCTD10P1-201ENST00000434203 625 ntBASIC6.35□□□□□ -1.39
MRE11P49959 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.35□□□□□ -1.39
MRE11P49959 AC002504.1-201ENST00000438281 691 ntBASIC6.35□□□□□ -1.39
MRE11P49959 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.35□□□□□ -1.39
MRE11P49959 RPL6P5-201ENST00000445678 828 ntBASIC6.35□□□□□ -1.39
MRE11P49959 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.35□□□□□ -1.39
MRE11P49959 TPT1P13-201ENST00000449760 499 ntBASIC6.35□□□□□ -1.39
MRE11P49959 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC6.35□□□□□ -1.39
MRE11P49959 OR2AO1P-201ENST00000476497 403 ntBASIC6.35□□□□□ -1.39
MRE11P49959 STRADBP1-201ENST00000478954 1281 ntBASIC6.35□□□□□ -1.39
MRE11P49959 UBA52P7-201ENST00000486088 380 ntBASIC6.35□□□□□ -1.39
MRE11P49959 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.35□□□□□ -1.39
MRE11P49959 AC093752.1-206ENST00000511823 336 ntBASIC6.35□□□□□ -1.39
MRE11P49959 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.35□□□□□ -1.39
MRE11P49959 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.35□□□□□ -1.39
MRE11P49959 RNU6-319P-201ENST00000516025 108 ntBASIC6.35□□□□□ -1.39
MRE11P49959 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
MRE11P49959 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.35□□□□□ -1.39
MRE11P49959 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.35□□□□□ -1.39
MRE11P49959 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.35□□□□□ -1.39
MRE11P49959 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.35□□□□□ -1.39
MRE11P49959 AC090819.1-201ENST00000523800 1111 ntBASIC6.35□□□□□ -1.39
MRE11P49959 AC087373.1-201ENST00000524920 491 ntBASIC6.35□□□□□ -1.39
MRE11P49959 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.35□□□□□ -1.39
MRE11P49959 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.35□□□□□ -1.39
MRE11P49959 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.35□□□□□ -1.39
MRE11P49959 AP000916.1-201ENST00000533869 835 ntBASIC6.35□□□□□ -1.39
MRE11P49959 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.35□□□□□ -1.39
MRE11P49959 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
MRE11P49959 AC008147.3-201ENST00000548666 354 ntBASIC6.35□□□□□ -1.39
MRE11P49959 CYB5AP5-201ENST00000549779 389 ntBASIC6.35□□□□□ -1.39
MRE11P49959 AC004825.1-201ENST00000555068 586 ntBASIC6.35□□□□□ -1.39
MRE11P49959 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.35□□□□□ -1.39
MRE11P49959 RN7SL708P-201ENST00000580952 299 ntBASIC6.35□□□□□ -1.39
MRE11P49959 MIR4505-201ENST00000582238 73 ntBASIC6.35□□□□□ -1.39
MRE11P49959 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.35□□□□□ -1.39
MRE11P49959 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.35□□□□□ -1.39
MRE11P49959 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
MRE11P49959 AL158042.1-201ENST00000605338 460 ntBASIC6.35□□□□□ -1.39
MRE11P49959 AL356752.1-201ENST00000615844 593 ntBASIC6.35□□□□□ -1.39
MRE11P49959 RFPL4AP6-201ENST00000616792 846 ntBASIC6.35□□□□□ -1.39
MRE11P49959 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.35□□□□□ -1.39
MRE11P49959 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.35□□□□□ -1.39
MRE11P49959 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.35□□□□□ -1.39
MRE11P49959 AC090897.3-201ENST00000636973 1157 ntBASIC6.35□□□□□ -1.39
MRE11P49959 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.35□□□□□ -1.39
MRE11P49959 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
MRE11P49959 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
MRE11P49959 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
MRE11P49959 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
MRE11P49959 MTCO1P7-201ENST00000419523 1542 ntBASIC6.35□□□□□ -1.39
MRE11P49959 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
MRE11P49959 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
MRE11P49959 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
MRE11P49959 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
MRE11P49959 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
MRE11P49959 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
MRE11P49959 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
MRE11P49959 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
MRE11P49959 AC245100.2-201ENST00000454544 1679 ntBASIC6.34□□□□□ -1.39
MRE11P49959 OR10AB1P-202ENST00000641219 1686 ntBASIC6.34□□□□□ -1.39
MRE11P49959 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
MRE11P49959 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
MRE11P49959 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
MRE11P49959 AL645733.1-201ENST00000402250 217 ntBASIC6.34□□□□□ -1.39
MRE11P49959 MIR1271-201ENST00000408537 86 ntBASIC6.34□□□□□ -1.39
MRE11P49959 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.34□□□□□ -1.39
MRE11P49959 AL158825.1-201ENST00000414735 521 ntBASIC6.34□□□□□ -1.39
MRE11P49959 AL031779.1-201ENST00000415663 330 ntBASIC6.34□□□□□ -1.39
MRE11P49959 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.34□□□□□ -1.39
MRE11P49959 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.34□□□□□ -1.39
MRE11P49959 AL034379.1-201ENST00000423216 253 ntBASIC6.34□□□□□ -1.39
MRE11P49959 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
MRE11P49959 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.34□□□□□ -1.39
MRE11P49959 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.34□□□□□ -1.39
MRE11P49959 BX119904.1-201ENST00000432026 348 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms