Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL590240.1-201ENST00000334118 313 ntBASIC5.05□□□□□ -1.6
LHX1P48742 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LHX1P48742 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.05□□□□□ -1.6
LHX1P48742 RPL26P37-201ENST00000411983 438 ntBASIC5.05□□□□□ -1.6
LHX1P48742 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.05□□□□□ -1.6
LHX1P48742 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.05□□□□□ -1.6
LHX1P48742 AC245028.1-201ENST00000423259 256 ntBASIC5.05□□□□□ -1.6
LHX1P48742 RGS17P1-201ENST00000423358 553 ntBASIC5.05□□□□□ -1.6
LHX1P48742 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.05□□□□□ -1.6
LHX1P48742 ZNF965P-201ENST00000432501 817 ntBASIC5.05□□□□□ -1.6
LHX1P48742 AL590762.3-201ENST00000436372 640 ntBASIC5.05□□□□□ -1.6
LHX1P48742 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.05□□□□□ -1.6
LHX1P48742 XKRY2-201ENST00000442362 1093 ntBASIC5.05□□□□□ -1.6
LHX1P48742 H2AFZP5-201ENST00000446960 382 ntBASIC5.05□□□□□ -1.6
LHX1P48742 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.05□□□□□ -1.6
LHX1P48742 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.05□□□□□ -1.6
LHX1P48742 AC107015.1-201ENST00000466902 747 ntBASIC5.05□□□□□ -1.6
LHX1P48742 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.05□□□□□ -1.6
LHX1P48742 BTG4P1-201ENST00000510421 183 ntBASIC5.05□□□□□ -1.6
LHX1P48742 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.05□□□□□ -1.6
LHX1P48742 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.05□□□□□ -1.6
LHX1P48742 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.05□□□□□ -1.6
LHX1P48742 RNA5SP249-201ENST00000516127 99 ntBASIC5.05□□□□□ -1.6
LHX1P48742 RNU2-30P-201ENST00000516209 141 ntBASIC5.05□□□□□ -1.6
LHX1P48742 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.05□□□□□ -1.6
LHX1P48742 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.05□□□□□ -1.6
LHX1P48742 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.05□□□□□ -1.6
LHX1P48742 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.05□□□□□ -1.6
LHX1P48742 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.05□□□□□ -1.6
LHX1P48742 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.05□□□□□ -1.6
LHX1P48742 AL136295.6-201ENST00000610486 658 ntBASIC5.05□□□□□ -1.6
LHX1P48742 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LHX1P48742 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.05□□□□□ -1.6
LHX1P48742 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.05□□□□□ -1.6
LHX1P48742 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LHX1P48742 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LHX1P48742 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LHX1P48742 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.05□□□□□ -1.6
LHX1P48742 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LHX1P48742 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LHX1P48742 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.05□□□□□ -1.6
LHX1P48742 AC010928.1-201ENST00000592477 1447 ntBASIC5.05□□□□□ -1.6
LHX1P48742 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LHX1P48742 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LHX1P48742 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX1P48742 AL121950.1-201ENST00000624993 2077 ntBASIC5.04□□□□□ -1.6
LHX1P48742 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LHX1P48742 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LHX1P48742 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.04□□□□□ -1.6
LHX1P48742 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
LHX1P48742 RNU4-7P-201ENST00000364758 141 ntBASIC5.04□□□□□ -1.6
LHX1P48742 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LHX1P48742 AL590762.2-201ENST00000395798 571 ntBASIC5.04□□□□□ -1.6
LHX1P48742 Z86062.1-201ENST00000406773 777 ntBASIC5.04□□□□□ -1.6
LHX1P48742 U3.35-201ENST00000408405 208 ntBASIC5.04□□□□□ -1.6
LHX1P48742 AC119751.6-201ENST00000416712 186 ntBASIC5.04□□□□□ -1.6
LHX1P48742 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.04□□□□□ -1.6
LHX1P48742 AC073464.3-201ENST00000422564 712 ntBASIC5.04□□□□□ -1.6
LHX1P48742 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.04□□□□□ -1.6
LHX1P48742 RPL17P35-201ENST00000432217 549 ntBASIC5.04□□□□□ -1.6
LHX1P48742 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.04□□□□□ -1.6
LHX1P48742 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.04□□□□□ -1.6
LHX1P48742 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.04□□□□□ -1.6
LHX1P48742 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.04□□□□□ -1.6
LHX1P48742 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.04□□□□□ -1.6
LHX1P48742 AC093663.2-201ENST00000484625 313 ntBASIC5.04□□□□□ -1.6
LHX1P48742 RN7SL205P-201ENST00000490174 284 ntBASIC5.04□□□□□ -1.6
LHX1P48742 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.04□□□□□ -1.6
LHX1P48742 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.04□□□□□ -1.6
LHX1P48742 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.04□□□□□ -1.6
LHX1P48742 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.04□□□□□ -1.6
LHX1P48742 CYCSP40-201ENST00000575927 294 ntBASIC5.04□□□□□ -1.6
LHX1P48742 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.04□□□□□ -1.6
LHX1P48742 RN7SL52P-201ENST00000584271 284 ntBASIC5.04□□□□□ -1.6
LHX1P48742 AC234771.5-201ENST00000600161 514 ntBASIC5.04□□□□□ -1.6
LHX1P48742 AC084373.1-201ENST00000603311 235 ntBASIC5.04□□□□□ -1.6
LHX1P48742 AC242628.1-201ENST00000606810 391 ntBASIC5.04□□□□□ -1.6
LHX1P48742 OR7A19P-201ENST00000608051 733 ntBASIC5.04□□□□□ -1.6
LHX1P48742 RN7SL722P-201ENST00000617780 284 ntBASIC5.04□□□□□ -1.6
LHX1P48742 RN7SL565P-201ENST00000618246 284 ntBASIC5.04□□□□□ -1.6
LHX1P48742 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.04□□□□□ -1.6
LHX1P48742 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LHX1P48742 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.04□□□□□ -1.6
LHX1P48742 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX1P48742 A2MP1-204ENST00000566278 4130 ntBASIC5.04□□□□□ -1.6
LHX1P48742 AC073136.1-201ENST00000449426 2884 ntBASIC5.04□□□□□ -1.6
LHX1P48742 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.04□□□□□ -1.6
LHX1P48742 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.04□□□□□ -1.6
LHX1P48742 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LHX1P48742 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LHX1P48742 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX1P48742 SOCS5P3-201ENST00000425115 1576 ntBASIC5.04□□□□□ -1.6
LHX1P48742 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LHX1P48742 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.03□□□□□ -1.6
LHX1P48742 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX1P48742 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LHX1P48742 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX1P48742 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LHX1P48742 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.03□□□□□ -1.6
LHX1P48742 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms