Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RPL23AP59-201ENST00000399415 461 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 SNRPFP1-201ENST00000414761 252 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 MTND4LP21-201ENST00000415303 295 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.31□□□□□ -1.56
NEDD4P46934 RPS27AP7-201ENST00000422792 455 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 NPM1P26-201ENST00000426339 738 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 CNOT7P1-201ENST00000429006 852 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.31□□□□□ -1.56
NEDD4P46934 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.31□□□□□ -1.56
NEDD4P46934 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.31□□□□□ -1.56
NEDD4P46934 AL162591.2-201ENST00000449634 317 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 CYCSP42-201ENST00000450823 238 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD4P46934 MTCYBP14-201ENST00000457471 715 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 RPL7AP10-201ENST00000481016 791 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.31□□□□□ -1.56
NEDD4P46934 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD4P46934 AC025674.1-201ENST00000507074 324 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.31□□□□□ -1.56
NEDD4P46934 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.31□□□□□ -1.56
NEDD4P46934 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.31□□□□□ -1.56
NEDD4P46934 AC023389.2-201ENST00000580031 955 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 AC091178.1-203ENST00000584586 279 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.31□□□□□ -1.56
NEDD4P46934 AC097505.1-201ENST00000610199 565 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.31□□□□□ -1.56
NEDD4P46934 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.31□□□□□ -1.56
NEDD4P46934 AC120338.1-201ENST00000625074 1541 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 MAPK10-349ENST00000641767 3661 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.31□□□□□ -1.56
NEDD4P46934 UGT2B26P-201ENST00000508672 1613 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD4P46934 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.31□□□□□ -1.56
NEDD4P46934 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
NEDD4P46934 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD4P46934 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD4P46934 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD4P46934 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.3□□□□□ -1.56
NEDD4P46934 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NEDD4P46934 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD4P46934 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD4P46934 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD4P46934 RNU4-23P-201ENST00000362839 140 ntBASIC5.3□□□□□ -1.56
NEDD4P46934 RNU1-32P-201ENST00000363937 159 ntBASIC5.3□□□□□ -1.56
NEDD4P46934 SDHCP2-201ENST00000398565 501 ntBASIC5.3□□□□□ -1.56
NEDD4P46934 ELOCP19-201ENST00000411919 318 ntBASIC5.3□□□□□ -1.56
NEDD4P46934 TMSB10P2-201ENST00000416049 131 ntBASIC5.3□□□□□ -1.56
NEDD4P46934 AL139095.3-201ENST00000419672 1203 ntBASIC5.3□□□□□ -1.56
NEDD4P46934 AC004448.2-201ENST00000422360 586 ntBASIC5.3□□□□□ -1.56
NEDD4P46934 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.3□□□□□ -1.56
NEDD4P46934 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.3□□□□□ -1.56
NEDD4P46934 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.3□□□□□ -1.56
NEDD4P46934 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD4P46934 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD4P46934 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.3□□□□□ -1.56
NEDD4P46934 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.3□□□□□ -1.56
NEDD4P46934 AC013356.1-201ENST00000489027 564 ntBASIC5.3□□□□□ -1.56
NEDD4P46934 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.3□□□□□ -1.56
NEDD4P46934 ARL4AP1-201ENST00000503220 705 ntBASIC5.3□□□□□ -1.56
NEDD4P46934 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.3□□□□□ -1.56
NEDD4P46934 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.3□□□□□ -1.56
NEDD4P46934 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.3□□□□□ -1.56
NEDD4P46934 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.3□□□□□ -1.56
NEDD4P46934 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.3□□□□□ -1.56
NEDD4P46934 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.3□□□□□ -1.56
NEDD4P46934 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD4P46934 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD4P46934 AP001160.4-201ENST00000596971 382 ntBASIC5.3□□□□□ -1.56
NEDD4P46934 BPIFA4P-203ENST00000603168 689 ntBASIC5.3□□□□□ -1.56
NEDD4P46934 AP002360.3-201ENST00000607673 710 ntBASIC5.3□□□□□ -1.56
NEDD4P46934 AC016911.1-201ENST00000613297 452 ntBASIC5.3□□□□□ -1.56
NEDD4P46934 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.3□□□□□ -1.56
NEDD4P46934 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD4P46934 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
NEDD4P46934 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.3□□□□□ -1.56
NEDD4P46934 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD4P46934 AC139713.2-214ENST00000642059 1811 ntBASIC5.3□□□□□ -1.56
NEDD4P46934 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.3□□□□□ -1.56
NEDD4P46934 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD4P46934 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD4P46934 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
NEDD4P46934 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD4P46934 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.29□□□□□ -1.56
NEDD4P46934 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NEDD4P46934 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
NEDD4P46934 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.29□□□□□ -1.56
NEDD4P46934 HSPD1P14-201ENST00000432666 1618 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NEDD4P46934 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NEDD4P46934 AC008033.1-201ENST00000216407 1162 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 AC126755.2-208ENST00000327792 462 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 AC138969.1-213ENST00000331436 462 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 RNU1-20P-201ENST00000363314 162 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 U3.22-201ENST00000391120 215 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 RPS4XP9-201ENST00000405151 780 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 FCF1P5-201ENST00000406490 482 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 RN7SKP216-201ENST00000411050 312 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.29□□□□□ -1.56
NEDD4P46934 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.29□□□□□ -1.56
NEDD4P46934 HSPE1P16-201ENST00000426640 348 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms