Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC112206.1-201ENST00000468416 477 ntBASIC4.86□□□□□ -1.63
TNFSF9P41273 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFSF9P41273 AC091178.1-203ENST00000584586 279 ntBASIC4.86□□□□□ -1.63
TNFSF9P41273 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFSF9P41273 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TNFSF9P41273 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.86□□□□□ -1.63
TNFSF9P41273 NAMPTP1-201ENST00000440465 2514 ntBASIC4.86□□□□□ -1.63
TNFSF9P41273 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
TNFSF9P41273 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF9P41273 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.85□□□□□ -1.63
TNFSF9P41273 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF9P41273 RPL21P108-201ENST00000413857 481 ntBASIC4.85□□□□□ -1.63
TNFSF9P41273 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.85□□□□□ -1.63
TNFSF9P41273 ARAFP1-201ENST00000422172 605 ntBASIC4.85□□□□□ -1.63
TNFSF9P41273 CBX1P1-201ENST00000440184 427 ntBASIC4.85□□□□□ -1.63
TNFSF9P41273 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.85□□□□□ -1.63
TNFSF9P41273 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF9P41273 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF9P41273 DHFRP3-201ENST00000455595 559 ntBASIC4.85□□□□□ -1.63
TNFSF9P41273 AC011276.1-201ENST00000469688 323 ntBASIC4.85□□□□□ -1.63
TNFSF9P41273 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF9P41273 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.85□□□□□ -1.63
TNFSF9P41273 AC138938.1-201ENST00000515431 782 ntBASIC4.85□□□□□ -1.63
TNFSF9P41273 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.85□□□□□ -1.63
TNFSF9P41273 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.85□□□□□ -1.63
TNFSF9P41273 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.85□□□□□ -1.63
TNFSF9P41273 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.85□□□□□ -1.63
TNFSF9P41273 AC005191.1-201ENST00000603950 358 ntBASIC4.85□□□□□ -1.63
TNFSF9P41273 QTRT1P1-201ENST00000604344 1078 ntBASIC4.85□□□□□ -1.63
TNFSF9P41273 AL356218.2-201ENST00000605264 187 ntBASIC4.85□□□□□ -1.63
TNFSF9P41273 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.85□□□□□ -1.63
TNFSF9P41273 AC006065.6-201ENST00000625201 545 ntBASIC4.85□□□□□ -1.63
TNFSF9P41273 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.85□□□□□ -1.63
TNFSF9P41273 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.85□□□□□ -1.63
TNFSF9P41273 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF9P41273 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TNFSF9P41273 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF9P41273 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF9P41273 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.85□□□□□ -1.63
TNFSF9P41273 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.85□□□□□ -1.63
TNFSF9P41273 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF9P41273 AC097461.1-201ENST00000568928 2821 ntBASIC4.85□□□□□ -1.63
TNFSF9P41273 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TNFSF9P41273 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.84□□□□□ -1.63
TNFSF9P41273 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TNFSF9P41273 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
TNFSF9P41273 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TNFSF9P41273 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TNFSF9P41273 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TNFSF9P41273 AL356317.1-201ENST00000396110 1436 ntBASIC4.84□□□□□ -1.63
TNFSF9P41273 SNORD96B-201ENST00000386148 79 ntBASIC4.84□□□□□ -1.63
TNFSF9P41273 MIR921-201ENST00000401133 56 ntBASIC4.84□□□□□ -1.63
TNFSF9P41273 FCF1P5-201ENST00000406490 482 ntBASIC4.84□□□□□ -1.63
TNFSF9P41273 RPL12P34-201ENST00000424532 479 ntBASIC4.84□□□□□ -1.63
TNFSF9P41273 FHP1-201ENST00000442741 703 ntBASIC4.84□□□□□ -1.63
TNFSF9P41273 Z95152.1-201ENST00000453556 656 ntBASIC4.84□□□□□ -1.63
TNFSF9P41273 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.84□□□□□ -1.63
TNFSF9P41273 RPL23AP24-201ENST00000458203 385 ntBASIC4.84□□□□□ -1.63
TNFSF9P41273 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.84□□□□□ -1.63
TNFSF9P41273 AL591473.1-201ENST00000464297 313 ntBASIC4.84□□□□□ -1.63
TNFSF9P41273 RPS23P7-201ENST00000466210 444 ntBASIC4.84□□□□□ -1.63
TNFSF9P41273 AC053481.1-201ENST00000467217 306 ntBASIC4.84□□□□□ -1.63
TNFSF9P41273 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.84□□□□□ -1.63
TNFSF9P41273 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.84□□□□□ -1.63
TNFSF9P41273 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.84□□□□□ -1.63
TNFSF9P41273 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.84□□□□□ -1.63
TNFSF9P41273 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
TNFSF9P41273 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.84□□□□□ -1.63
TNFSF9P41273 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TNFSF9P41273 MIR4472-2-201ENST00000582069 67 ntBASIC4.84□□□□□ -1.63
TNFSF9P41273 AC090948.1-201ENST00000607464 549 ntBASIC4.84□□□□□ -1.63
TNFSF9P41273 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.84□□□□□ -1.64
TNFSF9P41273 AC026951.1-201ENST00000559530 2459 ntBASIC4.84□□□□□ -1.64
TNFSF9P41273 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.84□□□□□ -1.64
TNFSF9P41273 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TNFSF9P41273 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TNFSF9P41273 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.84□□□□□ -1.64
TNFSF9P41273 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
TNFSF9P41273 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
TNFSF9P41273 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
TNFSF9P41273 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TNFSF9P41273 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF9P41273 CCT8P1-201ENST00000413611 1657 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 HSPD1P14-201ENST00000432666 1618 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TNFSF9P41273 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF9P41273 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF9P41273 AC008079.2-201ENST00000623543 20396 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.83□□□□□ -1.64
TNFSF9P41273 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFSF9P41273 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF9P41273 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF9P41273 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
TNFSF9P41273 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF9P41273 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TNFSF9P41273 RNU4-25P-201ENST00000410569 230 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.83□□□□□ -1.64
TNFSF9P41273 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFSF9P41273 CHIAP3-201ENST00000423668 1133 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms