Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
COL4A5P29400 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A5P29400 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A5P29400 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A5P29400 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL4A5P29400 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A5P29400 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.22□□□□□ -1.57
COL4A5P29400 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A5P29400 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A5P29400 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A5P29400 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
COL4A5P29400 SNORA9-201ENST00000384215 133 ntBASIC5.21□□□□□ -1.57
COL4A5P29400 ENSAP1-201ENST00000392855 326 ntBASIC5.21□□□□□ -1.57
COL4A5P29400 AC115285.1-201ENST00000424879 736 ntBASIC5.21□□□□□ -1.57
COL4A5P29400 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.21□□□□□ -1.57
COL4A5P29400 PPIAP13-201ENST00000434706 478 ntBASIC5.21□□□□□ -1.57
COL4A5P29400 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.21□□□□□ -1.57
COL4A5P29400 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.21□□□□□ -1.57
COL4A5P29400 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.21□□□□□ -1.57
COL4A5P29400 AC010460.1-201ENST00000507087 466 ntBASIC5.21□□□□□ -1.57
COL4A5P29400 AL592156.1-201ENST00000508758 304 ntBASIC5.21□□□□□ -1.57
COL4A5P29400 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.21□□□□□ -1.57
COL4A5P29400 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.21□□□□□ -1.57
COL4A5P29400 AC008739.3-201ENST00000603262 127 ntBASIC5.21□□□□□ -1.57
COL4A5P29400 AC015914.2-201ENST00000618167 288 ntBASIC5.21□□□□□ -1.57
COL4A5P29400 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.21□□□□□ -1.57
COL4A5P29400 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
COL4A5P29400 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.21□□□□□ -1.57
COL4A5P29400 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.21□□□□□ -1.58
COL4A5P29400 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A5P29400 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A5P29400 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.21□□□□□ -1.58
COL4A5P29400 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A5P29400 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A5P29400 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A5P29400 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.21□□□□□ -1.58
COL4A5P29400 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
COL4A5P29400 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.21□□□□□ -1.58
COL4A5P29400 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.21□□□□□ -1.58
COL4A5P29400 AL157884.3-201ENST00000448273 1184 ntBASIC5.21□□□□□ -1.58
COL4A5P29400 EIF2S2P5-201ENST00000457635 968 ntBASIC5.21□□□□□ -1.58
COL4A5P29400 RPS20P4-201ENST00000461659 355 ntBASIC5.21□□□□□ -1.58
COL4A5P29400 RPL35AP15-201ENST00000468042 339 ntBASIC5.21□□□□□ -1.58
COL4A5P29400 AC022336.1-201ENST00000475510 337 ntBASIC5.21□□□□□ -1.58
COL4A5P29400 ATP1B1P1-201ENST00000509767 915 ntBASIC5.21□□□□□ -1.58
COL4A5P29400 IFITM8P-201ENST00000522529 394 ntBASIC5.21□□□□□ -1.58
COL4A5P29400 OR5D2P-201ENST00000524390 911 ntBASIC5.21□□□□□ -1.58
COL4A5P29400 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.21□□□□□ -1.58
COL4A5P29400 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.21□□□□□ -1.58
COL4A5P29400 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.21□□□□□ -1.58
COL4A5P29400 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
COL4A5P29400 SNX18P3-202ENST00000565670 1750 ntBASIC5.21□□□□□ -1.58
COL4A5P29400 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A5P29400 AL161912.2-201ENST00000565707 3007 ntBASIC5.2□□□□□ -1.58
COL4A5P29400 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
COL4A5P29400 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A5P29400 AP001157.1-201ENST00000550837 2339 ntBASIC5.2□□□□□ -1.58
COL4A5P29400 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A5P29400 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A5P29400 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A5P29400 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.2□□□□□ -1.58
COL4A5P29400 AL080315.1-201ENST00000406055 466 ntBASIC5.2□□□□□ -1.58
COL4A5P29400 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.2□□□□□ -1.58
COL4A5P29400 RPL21P91-201ENST00000429231 479 ntBASIC5.2□□□□□ -1.58
COL4A5P29400 SERPINA7P1-201ENST00000443077 631 ntBASIC5.2□□□□□ -1.58
COL4A5P29400 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.2□□□□□ -1.58
COL4A5P29400 AC010374.1-201ENST00000503762 1237 ntBASIC5.2□□□□□ -1.58
COL4A5P29400 RNA5SP360-201ENST00000516555 118 ntBASIC5.2□□□□□ -1.58
COL4A5P29400 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.2□□□□□ -1.58
COL4A5P29400 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.2□□□□□ -1.58
COL4A5P29400 GTF2IP22-201ENST00000554443 182 ntBASIC5.2□□□□□ -1.58
COL4A5P29400 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.2□□□□□ -1.58
COL4A5P29400 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.2□□□□□ -1.58
COL4A5P29400 AL160290.3-201ENST00000604869 165 ntBASIC5.2□□□□□ -1.58
COL4A5P29400 AC010201.1-201ENST00000605051 540 ntBASIC5.2□□□□□ -1.58
COL4A5P29400 AL451086.1-201ENST00000605596 223 ntBASIC5.2□□□□□ -1.58
COL4A5P29400 AP002360.3-201ENST00000607673 710 ntBASIC5.2□□□□□ -1.58
COL4A5P29400 AC243756.2-201ENST00000618406 463 ntBASIC5.2□□□□□ -1.58
COL4A5P29400 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.2□□□□□ -1.58
COL4A5P29400 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL4A5P29400 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.2□□□□□ -1.58
COL4A5P29400 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A5P29400 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL4A5P29400 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.19□□□□□ -1.58
COL4A5P29400 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL4A5P29400 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL4A5P29400 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
COL4A5P29400 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.19□□□□□ -1.58
COL4A5P29400 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
COL4A5P29400 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL4A5P29400 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL4A5P29400 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL4A5P29400 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL4A5P29400 RNU11-201ENST00000387069 134 ntBASIC5.19□□□□□ -1.58
COL4A5P29400 SNORA74C-2-201ENST00000411179 201 ntBASIC5.19□□□□□ -1.58
COL4A5P29400 CRYBB2P1-203ENST00000415709 538 ntBASIC5.19□□□□□ -1.58
COL4A5P29400 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL4A5P29400 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL4A5P29400 AL035246.1-201ENST00000433554 1255 ntBASIC5.19□□□□□ -1.58
COL4A5P29400 TBCAP1-201ENST00000436520 327 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms