Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.4□□□□□ -1.54
CD40P25942 SERPINE4P-201ENST00000554978 281 ntBASIC5.4□□□□□ -1.54
CD40P25942 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CD40P25942 AC245505.1-201ENST00000556398 224 ntBASIC5.4□□□□□ -1.54
CD40P25942 CYCSP2-201ENST00000558168 301 ntBASIC5.4□□□□□ -1.54
CD40P25942 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.4□□□□□ -1.54
CD40P25942 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.4□□□□□ -1.54
CD40P25942 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.4□□□□□ -1.54
CD40P25942 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.4□□□□□ -1.54
CD40P25942 EIF1P4-201ENST00000572664 335 ntBASIC5.4□□□□□ -1.54
CD40P25942 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.4□□□□□ -1.54
CD40P25942 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.4□□□□□ -1.54
CD40P25942 MIR548AB-201ENST00000584917 84 ntBASIC5.4□□□□□ -1.54
CD40P25942 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.4□□□□□ -1.54
CD40P25942 AP003465.2-201ENST00000602571 373 ntBASIC5.4□□□□□ -1.54
CD40P25942 AP001521.1-201ENST00000609150 300 ntBASIC5.4□□□□□ -1.54
CD40P25942 AC006924.1-201ENST00000610750 559 ntBASIC5.4□□□□□ -1.54
CD40P25942 AC092266.1-201ENST00000610958 165 ntBASIC5.4□□□□□ -1.54
CD40P25942 AC087241.4-201ENST00000612441 480 ntBASIC5.4□□□□□ -1.54
CD40P25942 Z99129.1-201ENST00000612510 255 ntBASIC5.4□□□□□ -1.54
CD40P25942 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.4□□□□□ -1.54
CD40P25942 AL357562.1-201ENST00000624911 609 ntBASIC5.4□□□□□ -1.54
CD40P25942 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.4□□□□□ -1.54
CD40P25942 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CD40P25942 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CD40P25942 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CD40P25942 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CD40P25942 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.4□□□□□ -1.55
CD40P25942 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CD40P25942 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CD40P25942 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CD40P25942 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.4□□□□□ -1.55
CD40P25942 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CD40P25942 GUCY1B2-204ENST00000531898 1979 ntBASIC5.4□□□□□ -1.55
CD40P25942 ZNF37BP-203ENST00000452306 1352 ntBASIC5.4□□□□□ -1.55
CD40P25942 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.4□□□□□ -1.55
CD40P25942 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.4□□□□□ -1.55
CD40P25942 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CD40P25942 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CD40P25942 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.4□□□□□ -1.55
CD40P25942 PWAR1-201ENST00000624188 2414 ntBASIC5.39□□□□□ -1.55
CD40P25942 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.39□□□□□ -1.55
CD40P25942 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.39□□□□□ -1.55
CD40P25942 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC5.39□□□□□ -1.55
CD40P25942 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.39□□□□□ -1.55
CD40P25942 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CD40P25942 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CD40P25942 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.39□□□□□ -1.55
CD40P25942 MAPK10-287ENST00000641217 3037 ntBASIC5.39□□□□□ -1.55
CD40P25942 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CD40P25942 FGF7P2-201ENST00000332473 296 ntBASIC5.39□□□□□ -1.55
CD40P25942 SNRPEP3-201ENST00000338402 276 ntBASIC5.39□□□□□ -1.55
CD40P25942 RNA5SP333-201ENST00000363466 118 ntBASIC5.39□□□□□ -1.55
CD40P25942 RNA5SP334-201ENST00000364825 118 ntBASIC5.39□□□□□ -1.55
CD40P25942 RNU6-723P-201ENST00000383973 107 ntBASIC5.39□□□□□ -1.55
CD40P25942 RNU6-444P-201ENST00000383988 108 ntBASIC5.39□□□□□ -1.55
CD40P25942 SNORA51.9-201ENST00000384295 124 ntBASIC5.39□□□□□ -1.55
CD40P25942 AC004386.1-201ENST00000393214 761 ntBASIC5.39□□□□□ -1.55
CD40P25942 RNU2-28P-201ENST00000410457 189 ntBASIC5.39□□□□□ -1.55
CD40P25942 AC002524.1-201ENST00000411687 547 ntBASIC5.39□□□□□ -1.55
CD40P25942 RPS7P13-201ENST00000413955 498 ntBASIC5.39□□□□□ -1.55
CD40P25942 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.39□□□□□ -1.55
CD40P25942 TMBIM7P-201ENST00000418074 855 ntBASIC5.39□□□□□ -1.55
CD40P25942 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 AL953862.1-201ENST00000423016 168 ntBASIC5.39□□□□□ -1.55
CD40P25942 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.39□□□□□ -1.55
CD40P25942 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.39□□□□□ -1.55
CD40P25942 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.39□□□□□ -1.55
CD40P25942 AL831737.1-201ENST00000441288 271 ntBASIC5.39□□□□□ -1.55
CD40P25942 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 BMS1P10-201ENST00000443754 1120 ntBASIC5.39□□□□□ -1.55
CD40P25942 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.39□□□□□ -1.55
CD40P25942 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.39□□□□□ -1.55
CD40P25942 RPS23P9-201ENST00000448848 438 ntBASIC5.39□□□□□ -1.55
CD40P25942 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 TPT1P7-201ENST00000458300 517 ntBASIC5.39□□□□□ -1.55
CD40P25942 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.39□□□□□ -1.55
CD40P25942 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.39□□□□□ -1.55
CD40P25942 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.39□□□□□ -1.55
CD40P25942 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.39□□□□□ -1.55
CD40P25942 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CD40P25942 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.39□□□□□ -1.55
CD40P25942 PRMT5P1-201ENST00000514351 598 ntBASIC5.39□□□□□ -1.55
CD40P25942 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.39□□□□□ -1.55
CD40P25942 Y_RNA.710-201ENST00000516975 110 ntBASIC5.39□□□□□ -1.55
CD40P25942 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.39□□□□□ -1.55
CD40P25942 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.39□□□□□ -1.55
CD40P25942 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.39□□□□□ -1.55
CD40P25942 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.39□□□□□ -1.55
CD40P25942 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.39□□□□□ -1.55
CD40P25942 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.39□□□□□ -1.55
CD40P25942 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms