Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 RN7SKP106-201ENST00000410832 272 ntBASIC3.99□□□□□ -1.77
CTLA4P16410 RPL21P108-201ENST00000413857 481 ntBASIC3.99□□□□□ -1.77
CTLA4P16410 AC007394.1-201ENST00000421941 531 ntBASIC3.99□□□□□ -1.77
CTLA4P16410 AC006455.6-201ENST00000426192 893 ntBASIC3.99□□□□□ -1.77
CTLA4P16410 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.99□□□□□ -1.77
CTLA4P16410 RPS12P10-201ENST00000427031 377 ntBASIC3.99□□□□□ -1.77
CTLA4P16410 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTLA4P16410 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.99□□□□□ -1.77
CTLA4P16410 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.99□□□□□ -1.77
CTLA4P16410 AC114982.2-201ENST00000461396 358 ntBASIC3.99□□□□□ -1.77
CTLA4P16410 AC006967.1-201ENST00000467608 589 ntBASIC3.99□□□□□ -1.77
CTLA4P16410 AC012158.1-204ENST00000483430 465 ntBASIC3.99□□□□□ -1.77
CTLA4P16410 AC083982.1-201ENST00000485679 344 ntBASIC3.99□□□□□ -1.77
CTLA4P16410 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
CTLA4P16410 AC093890.1-201ENST00000502554 540 ntBASIC3.99□□□□□ -1.77
CTLA4P16410 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.99□□□□□ -1.77
CTLA4P16410 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.99□□□□□ -1.77
CTLA4P16410 AC122134.1-201ENST00000565664 1104 ntBASIC3.99□□□□□ -1.77
CTLA4P16410 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.99□□□□□ -1.77
CTLA4P16410 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.99□□□□□ -1.77
CTLA4P16410 TMEM30CP-203ENST00000637814 1035 ntBASIC3.99□□□□□ -1.77
CTLA4P16410 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.99□□□□□ -1.77
CTLA4P16410 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTLA4P16410 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTLA4P16410 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTLA4P16410 AC015813.6-201ENST00000624409 5808 ntBASIC3.99□□□□□ -1.77
CTLA4P16410 A2MP1-204ENST00000566278 4130 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTLA4P16410 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTLA4P16410 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTLA4P16410 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.98□□□□□ -1.77
CTLA4P16410 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTLA4P16410 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTLA4P16410 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CTLA4P16410 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTLA4P16410 RNU4-44P-201ENST00000363050 141 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CTLA4P16410 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 MIR550A3-201ENST00000390735 95 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 RNA5SP397-201ENST00000391323 118 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 AL049697.2-201ENST00000403708 294 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 MTND4LP21-201ENST00000415303 295 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.98□□□□□ -1.77
CTLA4P16410 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.98□□□□□ -1.77
CTLA4P16410 RPL23AP43-201ENST00000446445 471 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 AC012671.1-201ENST00000451912 203 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.98□□□□□ -1.77
CTLA4P16410 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.98□□□□□ -1.77
CTLA4P16410 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 AC092905.1-201ENST00000467527 949 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 AC105233.1-201ENST00000498840 781 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 ARL4AP1-201ENST00000503220 705 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.98□□□□□ -1.77
CTLA4P16410 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.98□□□□□ -1.77
CTLA4P16410 IGKV1-32-201ENST00000519290 311 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.98□□□□□ -1.77
CTLA4P16410 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CTLA4P16410 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.98□□□□□ -1.77
CTLA4P16410 MTND2P17-201ENST00000550281 688 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.98□□□□□ -1.77
CTLA4P16410 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.98□□□□□ -1.77
CTLA4P16410 AC091953.3-201ENST00000623220 236 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.98□□□□□ -1.77
CTLA4P16410 OR2L1P-202ENST00000641567 1023 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTLA4P16410 CUL4AP1-201ENST00000514750 1863 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTLA4P16410 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTLA4P16410 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTLA4P16410 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CTLA4P16410 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.98□□□□□ -1.77
CTLA4P16410 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTLA4P16410 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.98□□□□□ -1.77
CTLA4P16410 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTLA4P16410 AC125257.1-201ENST00000560400 2930 ntBASIC3.98□□□□□ -1.77
CTLA4P16410 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTLA4P16410 HCFC2P1-201ENST00000392864 1592 ntBASIC3.97□□□□□ -1.77
CTLA4P16410 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.97□□□□□ -1.77
CTLA4P16410 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.97□□□□□ -1.77
CTLA4P16410 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTLA4P16410 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.97□□□□□ -1.77
CTLA4P16410 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTLA4P16410 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.97□□□□□ -1.77
CTLA4P16410 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
CTLA4P16410 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTLA4P16410 RNA5SP22-201ENST00000365393 109 ntBASIC3.97□□□□□ -1.77
CTLA4P16410 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
CTLA4P16410 PDSS1P1-201ENST00000422953 1114 ntBASIC3.97□□□□□ -1.77
CTLA4P16410 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.97□□□□□ -1.77
CTLA4P16410 CENPIP1-201ENST00000425713 902 ntBASIC3.97□□□□□ -1.77
CTLA4P16410 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.97□□□□□ -1.77
CTLA4P16410 AL360081.1-201ENST00000428299 555 ntBASIC3.97□□□□□ -1.77
CTLA4P16410 AL049745.1-201ENST00000433953 286 ntBASIC3.97□□□□□ -1.77
CTLA4P16410 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.97□□□□□ -1.77
CTLA4P16410 RPL7L1P1-201ENST00000448259 785 ntBASIC3.97□□□□□ -1.77
CTLA4P16410 CEACAMP6-201ENST00000452007 574 ntBASIC3.97□□□□□ -1.77
CTLA4P16410 DDX39BP2-208ENST00000453923 258 ntBASIC3.97□□□□□ -1.77
CTLA4P16410 AC008897.1-201ENST00000494006 347 ntBASIC3.97□□□□□ -1.77
CTLA4P16410 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
CTLA4P16410 AC018442.3-201ENST00000523025 183 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms