Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL807761.1-201ENST00000417622 171 ntBASIC5.45□□□□□ -1.54
TOP1P11387 NPM1P33-201ENST00000438918 872 ntBASIC5.45□□□□□ -1.54
TOP1P11387 MRPL48P1-201ENST00000445390 636 ntBASIC5.45□□□□□ -1.54
TOP1P11387 OR52A4P-201ENST00000472867 958 ntBASIC5.45□□□□□ -1.54
TOP1P11387 RN7SL459P-201ENST00000481078 302 ntBASIC5.45□□□□□ -1.54
TOP1P11387 MTND4LP2-201ENST00000502312 285 ntBASIC5.45□□□□□ -1.54
TOP1P11387 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.45□□□□□ -1.54
TOP1P11387 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.45□□□□□ -1.54
TOP1P11387 AC111000.3-201ENST00000508057 576 ntBASIC5.45□□□□□ -1.54
TOP1P11387 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.45□□□□□ -1.54
TOP1P11387 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.45□□□□□ -1.54
TOP1P11387 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.45□□□□□ -1.54
TOP1P11387 RN7SKP92-201ENST00000517266 244 ntBASIC5.45□□□□□ -1.54
TOP1P11387 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.45□□□□□ -1.54
TOP1P11387 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.45□□□□□ -1.54
TOP1P11387 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.45□□□□□ -1.54
TOP1P11387 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.45□□□□□ -1.54
TOP1P11387 SNORD91B-202ENST00000608459 222 ntBASIC5.45□□□□□ -1.54
TOP1P11387 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.45□□□□□ -1.54
TOP1P11387 LINC01355-201ENST00000566551 5444 ntBASIC5.45□□□□□ -1.54
TOP1P11387 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TOP1P11387 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TOP1P11387 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.45□□□□□ -1.54
TOP1P11387 MAPK10-320ENST00000641462 6696 ntBASIC5.45□□□□□ -1.54
TOP1P11387 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
TOP1P11387 NEAT1-202ENST00000501122 22743 ntBASIC5.44□□□□□ -1.54
TOP1P11387 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.44□□□□□ -1.54
TOP1P11387 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TOP1P11387 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.44□□□□□ -1.54
TOP1P11387 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TOP1P11387 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TOP1P11387 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TOP1P11387 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TOP1P11387 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TOP1P11387 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.44□□□□□ -1.54
TOP1P11387 AC096644.3-201ENST00000416788 338 ntBASIC5.44□□□□□ -1.54
TOP1P11387 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.44□□□□□ -1.54
TOP1P11387 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.44□□□□□ -1.54
TOP1P11387 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.44□□□□□ -1.54
TOP1P11387 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.44□□□□□ -1.54
TOP1P11387 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.44□□□□□ -1.54
TOP1P11387 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.44□□□□□ -1.54
TOP1P11387 AC006463.2-201ENST00000473326 348 ntBASIC5.44□□□□□ -1.54
TOP1P11387 AC104763.1-201ENST00000475274 360 ntBASIC5.44□□□□□ -1.54
TOP1P11387 AC021242.1-201ENST00000507315 2035 ntBASIC5.44□□□□□ -1.54
TOP1P11387 AC007016.1-201ENST00000512110 244 ntBASIC5.44□□□□□ -1.54
TOP1P11387 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.44□□□□□ -1.54
TOP1P11387 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.44□□□□□ -1.54
TOP1P11387 RNA5SP464-201ENST00000516251 108 ntBASIC5.44□□□□□ -1.54
TOP1P11387 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.44□□□□□ -1.54
TOP1P11387 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TOP1P11387 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.44□□□□□ -1.54
TOP1P11387 AC125257.1-201ENST00000560400 2930 ntBASIC5.44□□□□□ -1.54
TOP1P11387 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.44□□□□□ -1.54
TOP1P11387 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.44□□□□□ -1.54
TOP1P11387 AC068790.4-201ENST00000602474 263 ntBASIC5.44□□□□□ -1.54
TOP1P11387 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.44□□□□□ -1.54
TOP1P11387 AC019193.2-201ENST00000610012 634 ntBASIC5.44□□□□□ -1.54
TOP1P11387 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.44□□□□□ -1.54
TOP1P11387 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TOP1P11387 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.44□□□□□ -1.54
TOP1P11387 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TOP1P11387 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TOP1P11387 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.44□□□□□ -1.54
TOP1P11387 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
TOP1P11387 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.44□□□□□ -1.54
TOP1P11387 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TOP1P11387 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.43□□□□□ -1.54
TOP1P11387 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
TOP1P11387 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TOP1P11387 VPS35P1-201ENST00000563400 1518 ntBASIC5.43□□□□□ -1.54
TOP1P11387 KARSP3-201ENST00000571212 1504 ntBASIC5.43□□□□□ -1.54
TOP1P11387 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TOP1P11387 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
TOP1P11387 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TOP1P11387 AC010132.2-201ENST00000295493 1043 ntBASIC5.43□□□□□ -1.54
TOP1P11387 SNORA71.2-201ENST00000364941 134 ntBASIC5.43□□□□□ -1.54
TOP1P11387 RNU6-167P-201ENST00000384292 106 ntBASIC5.43□□□□□ -1.54
TOP1P11387 AC006065.1-201ENST00000422539 802 ntBASIC5.43□□□□□ -1.54
TOP1P11387 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.43□□□□□ -1.54
TOP1P11387 MTCO1P51-201ENST00000427672 1060 ntBASIC5.43□□□□□ -1.54
TOP1P11387 TPT1P13-201ENST00000449760 499 ntBASIC5.43□□□□□ -1.54
TOP1P11387 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.43□□□□□ -1.54
TOP1P11387 AK3P4-201ENST00000504283 583 ntBASIC5.43□□□□□ -1.54
TOP1P11387 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.43□□□□□ -1.54
TOP1P11387 RFPL4AP5-201ENST00000514977 504 ntBASIC5.43□□□□□ -1.54
TOP1P11387 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.43□□□□□ -1.54
TOP1P11387 AL133338.2-201ENST00000604292 736 ntBASIC5.43□□□□□ -1.54
TOP1P11387 IMMP1LP1-201ENST00000605170 488 ntBASIC5.43□□□□□ -1.54
TOP1P11387 AL135786.2-201ENST00000608422 615 ntBASIC5.43□□□□□ -1.54
TOP1P11387 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.43□□□□□ -1.54
TOP1P11387 AC010435.1-201ENST00000623353 1177 ntBASIC5.43□□□□□ -1.54
TOP1P11387 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.43□□□□□ -1.54
TOP1P11387 TMEM30CP-203ENST00000637814 1035 ntBASIC5.43□□□□□ -1.54
TOP1P11387 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TOP1P11387 OR14L1P-202ENST00000641545 3009 ntBASIC5.43□□□□□ -1.54
TOP1P11387 AC083843.3-201ENST00000623679 2186 ntBASIC5.43□□□□□ -1.54
TOP1P11387 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.43□□□□□ -1.54
TOP1P11387 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TOP1P11387 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms