Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.5□□□□□ -1.85
CXCL1P09341 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC3.5□□□□□ -1.85
CXCL1P09341 AC018797.3-201ENST00000513388 1241 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC3.5□□□□□ -1.85
CXCL1P09341 AC024405.1-201ENST00000532521 1042 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.5□□□□□ -1.85
CXCL1P09341 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC3.5□□□□□ -1.85
CXCL1P09341 ELOCP28-201ENST00000590044 317 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.5□□□□□ -1.85
CXCL1P09341 AL589674.2-201ENST00000604304 337 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 MIR432-201ENST00000606207 94 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.5□□□□□ -1.85
CXCL1P09341 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.5□□□□□ -1.85
CXCL1P09341 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CXCL1P09341 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CXCL1P09341 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CXCL1P09341 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CXCL1P09341 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CXCL1P09341 CYP4Z2P-201ENST00000423332 1512 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 VPS35P1-201ENST00000563400 1518 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CXCL1P09341 HSPA8P1-201ENST00000425843 1833 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.49□□□□□ -1.85
CXCL1P09341 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
CXCL1P09341 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.49□□□□□ -1.85
CXCL1P09341 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CXCL1P09341 RN7SKP115-201ENST00000363177 317 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.49□□□□□ -1.85
CXCL1P09341 AL590762.2-201ENST00000395798 571 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 AL589647.1-201ENST00000402485 466 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.49□□□□□ -1.85
CXCL1P09341 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC3.49□□□□□ -1.85
CXCL1P09341 AC114755.2-201ENST00000413520 361 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 VN1R3-201ENST00000418822 919 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 RPL12P43-201ENST00000420608 499 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 AC093698.1-201ENST00000423843 571 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.49□□□□□ -1.85
CXCL1P09341 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.49□□□□□ -1.85
CXCL1P09341 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC3.49□□□□□ -1.85
CXCL1P09341 SLC25A18P1-201ENST00000449385 454 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.49□□□□□ -1.85
CXCL1P09341 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.49□□□□□ -1.85
CXCL1P09341 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.49□□□□□ -1.85
CXCL1P09341 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.49□□□□□ -1.85
CXCL1P09341 RNU1-6P-201ENST00000516290 144 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.49□□□□□ -1.85
CXCL1P09341 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC3.49□□□□□ -1.85
CXCL1P09341 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.49□□□□□ -1.85
CXCL1P09341 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.49□□□□□ -1.85
CXCL1P09341 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.49□□□□□ -1.85
CXCL1P09341 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.49□□□□□ -1.85
CXCL1P09341 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.49□□□□□ -1.85
CXCL1P09341 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.49□□□□□ -1.85
CXCL1P09341 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CXCL1P09341 AC005726.4-201ENST00000582858 458 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.49□□□□□ -1.85
CXCL1P09341 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.49□□□□□ -1.85
CXCL1P09341 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC3.49□□□□□ -1.85
CXCL1P09341 AC103792.1-201ENST00000603591 919 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 AC067838.1-201ENST00000606064 577 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 AL645927.2-201ENST00000618350 349 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CXCL1P09341 AC136428.4-201ENST00000634254 1155 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 BMS1P21-201ENST00000634565 365 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.49□□□□□ -1.85
CXCL1P09341 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CXCL1P09341 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CXCL1P09341 AC125257.1-201ENST00000560400 2930 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 AC090971.4-201ENST00000560291 1800 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CXCL1P09341 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC3.49□□□□□ -1.85
CXCL1P09341 AC008725.1-201ENST00000605123 2263 ntBASIC3.49□□□□□ -1.85
CXCL1P09341 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CXCL1P09341 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CXCL1P09341 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.48□□□□□ -1.85
CXCL1P09341 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.48□□□□□ -1.85
CXCL1P09341 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CXCL1P09341 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CXCL1P09341 ZNF733P-202ENST00000444809 1573 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CXCL1P09341 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.48□□□□□ -1.85
CXCL1P09341 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CXCL1P09341 RNU1-63P-201ENST00000383902 164 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 RNU6-1263P-201ENST00000384601 106 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CXCL1P09341 AL138878.1-201ENST00000405131 347 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 AL603766.1-201ENST00000407763 664 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 RN7SKP56-201ENST00000410513 331 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.48□□□□□ -1.85
CXCL1P09341 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.48□□□□□ -1.85
CXCL1P09341 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC3.48□□□□□ -1.85
CXCL1P09341 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC3.48□□□□□ -1.85
CXCL1P09341 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.48□□□□□ -1.85
CXCL1P09341 RPL23AP25-201ENST00000430973 463 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.48□□□□□ -1.85
CXCL1P09341 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.48□□□□□ -1.85
CXCL1P09341 AL137845.2-201ENST00000444292 988 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms