Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC119751.4-201ENST00000507498 357 ntBASIC4.87□□□□□ -1.63
CD48P09326 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.87□□□□□ -1.63
CD48P09326 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD48P09326 RN7SKP157-201ENST00000516174 282 ntBASIC4.87□□□□□ -1.63
CD48P09326 RNU1-6P-201ENST00000516290 144 ntBASIC4.87□□□□□ -1.63
CD48P09326 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.87□□□□□ -1.63
CD48P09326 MTND1P6-201ENST00000523621 946 ntBASIC4.87□□□□□ -1.63
CD48P09326 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.87□□□□□ -1.63
CD48P09326 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.87□□□□□ -1.63
CD48P09326 AC027176.2-201ENST00000559166 746 ntBASIC4.87□□□□□ -1.63
CD48P09326 BGLT3-201ENST00000564523 994 ntBASIC4.87□□□□□ -1.63
CD48P09326 AC027281.1-201ENST00000574178 758 ntBASIC4.87□□□□□ -1.63
CD48P09326 RN7SL176P-201ENST00000580352 264 ntBASIC4.87□□□□□ -1.63
CD48P09326 AC107993.1-201ENST00000591343 684 ntBASIC4.87□□□□□ -1.63
CD48P09326 AC017076.1-201ENST00000607613 578 ntBASIC4.87□□□□□ -1.63
CD48P09326 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.87□□□□□ -1.63
CD48P09326 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.87□□□□□ -1.63
CD48P09326 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CD48P09326 AL031119.1-201ENST00000404707 1879 ntBASIC4.87□□□□□ -1.63
CD48P09326 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.87□□□□□ -1.63
CD48P09326 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.87□□□□□ -1.63
CD48P09326 DDX18P4-201ENST00000511690 1966 ntBASIC4.87□□□□□ -1.63
CD48P09326 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD48P09326 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.87□□□□□ -1.63
CD48P09326 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.87□□□□□ -1.63
CD48P09326 CASC19-204ENST00000641001 2055 ntBASIC4.87□□□□□ -1.63
CD48P09326 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD48P09326 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.87□□□□□ -1.63
CD48P09326 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
CD48P09326 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD48P09326 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD48P09326 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD48P09326 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD48P09326 AL022322.2-201ENST00000624072 20397 ntBASIC4.86□□□□□ -1.63
CD48P09326 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
CD48P09326 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CD48P09326 RN7SKP149-201ENST00000363008 344 ntBASIC4.86□□□□□ -1.63
CD48P09326 RNU4-44P-201ENST00000363050 141 ntBASIC4.86□□□□□ -1.63
CD48P09326 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CD48P09326 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD48P09326 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.86□□□□□ -1.63
CD48P09326 MIR105-2-201ENST00000385083 81 ntBASIC4.86□□□□□ -1.63
CD48P09326 SNORD96B-201ENST00000386148 79 ntBASIC4.86□□□□□ -1.63
CD48P09326 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.86□□□□□ -1.63
CD48P09326 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.86□□□□□ -1.63
CD48P09326 AC073508.1-201ENST00000428866 656 ntBASIC4.86□□□□□ -1.63
CD48P09326 NRBF2P3-201ENST00000432731 865 ntBASIC4.86□□□□□ -1.63
CD48P09326 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.86□□□□□ -1.63
CD48P09326 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
CD48P09326 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.86□□□□□ -1.63
CD48P09326 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
CD48P09326 IGLV2-34-201ENST00000490007 283 ntBASIC4.86□□□□□ -1.63
CD48P09326 NDUFA5P12-201ENST00000503796 343 ntBASIC4.86□□□□□ -1.63
CD48P09326 RNU6-491P-201ENST00000516099 110 ntBASIC4.86□□□□□ -1.63
CD48P09326 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.86□□□□□ -1.63
CD48P09326 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.86□□□□□ -1.63
CD48P09326 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.86□□□□□ -1.63
CD48P09326 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.86□□□□□ -1.63
CD48P09326 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.86□□□□□ -1.63
CD48P09326 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.86□□□□□ -1.63
CD48P09326 AC010547.7-201ENST00000570323 333 ntBASIC4.86□□□□□ -1.63
CD48P09326 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.86□□□□□ -1.63
CD48P09326 MIR4646-201ENST00000580775 63 ntBASIC4.86□□□□□ -1.63
CD48P09326 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.86□□□□□ -1.63
CD48P09326 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.86□□□□□ -1.63
CD48P09326 COX6CP4-201ENST00000605798 228 ntBASIC4.86□□□□□ -1.63
CD48P09326 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.86□□□□□ -1.63
CD48P09326 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CD48P09326 AC090772.4-201ENST00000623599 362 ntBASIC4.86□□□□□ -1.63
CD48P09326 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD48P09326 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CD48P09326 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.86□□□□□ -1.63
CD48P09326 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CD48P09326 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.86□□□□□ -1.63
CD48P09326 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CD48P09326 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
CD48P09326 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD48P09326 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD48P09326 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CD48P09326 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD48P09326 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CD48P09326 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CD48P09326 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD48P09326 SNORA74A-201ENST00000364089 198 ntBASIC4.85□□□□□ -1.63
CD48P09326 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD48P09326 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.85□□□□□ -1.63
CD48P09326 AL591848.1-201ENST00000413092 322 ntBASIC4.85□□□□□ -1.63
CD48P09326 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.85□□□□□ -1.63
CD48P09326 RPS26P2-201ENST00000440331 348 ntBASIC4.85□□□□□ -1.63
CD48P09326 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.85□□□□□ -1.63
CD48P09326 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.85□□□□□ -1.63
CD48P09326 OR1H1P-201ENST00000448731 937 ntBASIC4.85□□□□□ -1.63
CD48P09326 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.85□□□□□ -1.63
CD48P09326 RN7SL329P-201ENST00000467740 299 ntBASIC4.85□□□□□ -1.63
CD48P09326 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.85□□□□□ -1.63
CD48P09326 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.85□□□□□ -1.63
CD48P09326 AC108157.1-201ENST00000510511 539 ntBASIC4.85□□□□□ -1.63
CD48P09326 RNU2-30P-201ENST00000516209 141 ntBASIC4.85□□□□□ -1.63
CD48P09326 RN7SKP276-201ENST00000516242 268 ntBASIC4.85□□□□□ -1.63
CD48P09326 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms