Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SPTA1P02549 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 TBCAP2-201ENST00000416175 326 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 RPL7AP49-201ENST00000429522 581 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 AL591438.1-201ENST00000433508 581 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 NDUFB4P8-201ENST00000435351 367 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SPTA1P02549 RNU6-709P-201ENST00000517257 104 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.19□□□□□ -1.74
SPTA1P02549 AP000827.1-201ENST00000527814 258 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC4.19□□□□□ -1.74
SPTA1P02549 AP001804.2-201ENST00000533932 910 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.19□□□□□ -1.74
SPTA1P02549 AL357559.1-201ENST00000622228 274 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SPTA1P02549 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SPTA1P02549 AC008758.3-201ENST00000507003 1829 ntBASIC4.18□□□□□ -1.74
SPTA1P02549 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
SPTA1P02549 MARK2P15-201ENST00000432204 2186 ntBASIC4.18□□□□□ -1.74
SPTA1P02549 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SPTA1P02549 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SPTA1P02549 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SPTA1P02549 AL121950.1-201ENST00000624993 2077 ntBASIC4.18□□□□□ -1.74
SPTA1P02549 RNU1-130P-201ENST00000363930 160 ntBASIC4.18□□□□□ -1.74
SPTA1P02549 RNA5SP223-201ENST00000365174 120 ntBASIC4.18□□□□□ -1.74
SPTA1P02549 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.18□□□□□ -1.74
SPTA1P02549 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.18□□□□□ -1.74
SPTA1P02549 COX6CP15-201ENST00000426313 211 ntBASIC4.18□□□□□ -1.74
SPTA1P02549 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.18□□□□□ -1.74
SPTA1P02549 AC104849.1-201ENST00000462623 405 ntBASIC4.18□□□□□ -1.74
SPTA1P02549 IGBP1P4-201ENST00000503202 879 ntBASIC4.18□□□□□ -1.74
SPTA1P02549 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.18□□□□□ -1.74
SPTA1P02549 AP001267.4-201ENST00000602598 545 ntBASIC4.18□□□□□ -1.74
SPTA1P02549 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.18□□□□□ -1.74
SPTA1P02549 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.18□□□□□ -1.74
SPTA1P02549 AL022401.1-201ENST00000619498 108 ntBASIC4.18□□□□□ -1.74
SPTA1P02549 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SPTA1P02549 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC4.18□□□□□ -1.74
SPTA1P02549 FAM91A3P-201ENST00000456826 2544 ntBASIC4.18□□□□□ -1.74
SPTA1P02549 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.18□□□□□ -1.74
SPTA1P02549 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.18□□□□□ -1.74
SPTA1P02549 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SPTA1P02549 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SPTA1P02549 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SPTA1P02549 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.17□□□□□ -1.74
SPTA1P02549 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SPTA1P02549 GNG5P2-201ENST00000372054 207 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.17□□□□□ -1.74
SPTA1P02549 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.17□□□□□ -1.74
SPTA1P02549 AC004980.3-201ENST00000447046 365 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.17□□□□□ -1.74
SPTA1P02549 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.17□□□□□ -1.74
SPTA1P02549 AC091868.1-201ENST00000508746 304 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 RN7SKP13-201ENST00000515933 244 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.17□□□□□ -1.74
SPTA1P02549 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.17□□□□□ -1.74
SPTA1P02549 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.17□□□□□ -1.74
SPTA1P02549 IPO5P1-202ENST00000600039 287 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 OR7A19P-201ENST00000608051 733 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 AP003497.2-201ENST00000624220 967 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SPTA1P02549 AC106871.1-201ENST00000568324 3102 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SPTA1P02549 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.17□□□□□ -1.74
SPTA1P02549 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 SALL4P2-201ENST00000423288 2910 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SPTA1P02549 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.17□□□□□ -1.74
SPTA1P02549 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
SPTA1P02549 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SPTA1P02549 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SPTA1P02549 MIR218-2-201ENST00000385006 110 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SPTA1P02549 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.17□□□□□ -1.74
SPTA1P02549 AC092651.1-201ENST00000426110 312 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 GOT2P5-201ENST00000433995 546 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 AL451139.1-201ENST00000434718 346 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.17□□□□□ -1.74
SPTA1P02549 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.17□□□□□ -1.74
SPTA1P02549 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.17□□□□□ -1.74
SPTA1P02549 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.17□□□□□ -1.74
SPTA1P02549 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.17□□□□□ -1.74
SPTA1P02549 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.17□□□□□ -1.74
SPTA1P02549 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SPTA1P02549 AC093249.4-201ENST00000564755 259 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SPTA1P02549 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.17□□□□□ -1.74
SPTA1P02549 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SPTA1P02549 TCP11X1-202ENST00000622971 1372 ntBASIC4.17□□□□□ -1.74
SPTA1P02549 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.17□□□□□ -1.74
SPTA1P02549 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SPTA1P02549 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SPTA1P02549 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.17□□□□□ -1.74
SPTA1P02549 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.17□□□□□ -1.74
SPTA1P02549 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPTA1P02549 SNORA71.2-201ENST00000364941 134 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 RN7SKP33-201ENST00000410942 340 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.16□□□□□ -1.74
SPTA1P02549 AL450023.3-201ENST00000440592 271 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 RPL23AP43-201ENST00000446445 471 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms