Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.28□□□□□ -1.56
COL2A1P02458 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL2A1P02458 MIR3065-201ENST00000390137 79 ntBASIC5.28□□□□□ -1.56
COL2A1P02458 SNORA74C-2-201ENST00000411179 201 ntBASIC5.28□□□□□ -1.56
COL2A1P02458 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.28□□□□□ -1.56
COL2A1P02458 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.28□□□□□ -1.56
COL2A1P02458 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.28□□□□□ -1.56
COL2A1P02458 RN7SL542P-201ENST00000467147 294 ntBASIC5.28□□□□□ -1.56
COL2A1P02458 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.28□□□□□ -1.56
COL2A1P02458 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.28□□□□□ -1.56
COL2A1P02458 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.28□□□□□ -1.56
COL2A1P02458 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.28□□□□□ -1.56
COL2A1P02458 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.28□□□□□ -1.56
COL2A1P02458 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.28□□□□□ -1.56
COL2A1P02458 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.28□□□□□ -1.56
COL2A1P02458 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.28□□□□□ -1.56
COL2A1P02458 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.28□□□□□ -1.56
COL2A1P02458 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.28□□□□□ -1.56
COL2A1P02458 BNIP3P11-201ENST00000603878 563 ntBASIC5.28□□□□□ -1.56
COL2A1P02458 BNIP3P41-202ENST00000616656 861 ntBASIC5.28□□□□□ -1.56
COL2A1P02458 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
COL2A1P02458 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.28□□□□□ -1.56
COL2A1P02458 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.28□□□□□ -1.56
COL2A1P02458 AC004656.1-201ENST00000568479 4951 ntBASIC5.28□□□□□ -1.56
COL2A1P02458 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.28□□□□□ -1.56
COL2A1P02458 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL2A1P02458 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL2A1P02458 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL2A1P02458 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL2A1P02458 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL2A1P02458 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL2A1P02458 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.27□□□□□ -1.57
COL2A1P02458 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.27□□□□□ -1.57
COL2A1P02458 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.27□□□□□ -1.57
COL2A1P02458 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
COL2A1P02458 MIR921-201ENST00000401133 56 ntBASIC5.27□□□□□ -1.57
COL2A1P02458 PPIAP31-201ENST00000405422 495 ntBASIC5.27□□□□□ -1.57
COL2A1P02458 AL080315.1-201ENST00000406055 466 ntBASIC5.27□□□□□ -1.57
COL2A1P02458 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.27□□□□□ -1.57
COL2A1P02458 AL121578.1-201ENST00000428051 892 ntBASIC5.27□□□□□ -1.57
COL2A1P02458 SNRPCP3-201ENST00000474888 476 ntBASIC5.27□□□□□ -1.57
COL2A1P02458 RPL35P6-201ENST00000490024 372 ntBASIC5.27□□□□□ -1.57
COL2A1P02458 AC108475.1-201ENST00000507880 950 ntBASIC5.27□□□□□ -1.57
COL2A1P02458 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.27□□□□□ -1.57
COL2A1P02458 AC138832.1-201ENST00000522871 556 ntBASIC5.27□□□□□ -1.57
COL2A1P02458 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.27□□□□□ -1.57
COL2A1P02458 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.27□□□□□ -1.57
COL2A1P02458 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.27□□□□□ -1.57
COL2A1P02458 AC011477.5-201ENST00000586571 259 ntBASIC5.27□□□□□ -1.57
COL2A1P02458 AC091979.2-201ENST00000607514 214 ntBASIC5.27□□□□□ -1.57
COL2A1P02458 MIR3653-201ENST00000625572 110 ntBASIC5.27□□□□□ -1.57
COL2A1P02458 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.27□□□□□ -1.57
COL2A1P02458 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL2A1P02458 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
COL2A1P02458 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL2A1P02458 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL2A1P02458 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL2A1P02458 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.27□□□□□ -1.57
COL2A1P02458 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.27□□□□□ -1.57
COL2A1P02458 AL355852.1-201ENST00000454081 1771 ntBASIC5.27□□□□□ -1.57
COL2A1P02458 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
COL2A1P02458 RNU1-94P-201ENST00000362627 173 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 RNA5SP387-201ENST00000364226 106 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 MIR670-201ENST00000390142 98 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
COL2A1P02458 ATP5F1P3-201ENST00000397213 657 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 FCF1P5-201ENST00000406490 482 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 RNA5SP317-201ENST00000410176 116 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 RNA5SP311-201ENST00000411290 116 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.26□□□□□ -1.57
COL2A1P02458 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.26□□□□□ -1.57
COL2A1P02458 BTF3P10-201ENST00000433415 495 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 AC092473.1-201ENST00000441098 221 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.26□□□□□ -1.57
COL2A1P02458 VN1R34P-201ENST00000447387 883 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL2A1P02458 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.26□□□□□ -1.57
COL2A1P02458 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.26□□□□□ -1.57
COL2A1P02458 RNA5SP315-201ENST00000516340 116 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 RNA5SP312-201ENST00000517068 116 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.26□□□□□ -1.57
COL2A1P02458 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.26□□□□□ -1.57
COL2A1P02458 OR4A2P-201ENST00000527276 913 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.26□□□□□ -1.57
COL2A1P02458 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.26□□□□□ -1.57
COL2A1P02458 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.26□□□□□ -1.57
COL2A1P02458 MIR4298-201ENST00000584380 73 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.26□□□□□ -1.57
COL2A1P02458 ADAD1P2-201ENST00000588476 646 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 AC079587.1-201ENST00000603846 277 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.26□□□□□ -1.57
COL2A1P02458 AP003497.2-201ENST00000624220 967 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL2A1P02458 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL2A1P02458 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.26□□□□□ -1.57
COL2A1P02458 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL2A1P02458 AC139769.1-204ENST00000472297 1931 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL2A1P02458 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL2A1P02458 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms