Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TNFP01375 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TNFP01375 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.41□□□□□ -1.7
TNFP01375 AL592291.1-201ENST00000403830 352 ntBASIC4.41□□□□□ -1.7
TNFP01375 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.41□□□□□ -1.7
TNFP01375 AC011933.1-201ENST00000413334 321 ntBASIC4.41□□□□□ -1.7
TNFP01375 SNRPFP1-201ENST00000414761 252 ntBASIC4.41□□□□□ -1.7
TNFP01375 AC234779.1-201ENST00000425910 285 ntBASIC4.41□□□□□ -1.7
TNFP01375 RPL7P32-201ENST00000457119 744 ntBASIC4.41□□□□□ -1.7
TNFP01375 AC116533.1-201ENST00000459748 321 ntBASIC4.41□□□□□ -1.7
TNFP01375 RN7SL98P-201ENST00000462271 300 ntBASIC4.41□□□□□ -1.7
TNFP01375 AC053481.1-201ENST00000467217 306 ntBASIC4.41□□□□□ -1.7
TNFP01375 AC010618.1-201ENST00000469924 477 ntBASIC4.41□□□□□ -1.7
TNFP01375 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.41□□□□□ -1.7
TNFP01375 RNA5SP497-201ENST00000516081 97 ntBASIC4.41□□□□□ -1.7
TNFP01375 AP002981.1-201ENST00000517692 975 ntBASIC4.41□□□□□ -1.7
TNFP01375 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.41□□□□□ -1.7
TNFP01375 AC138701.1-201ENST00000524329 714 ntBASIC4.41□□□□□ -1.7
TNFP01375 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.41□□□□□ -1.7
TNFP01375 TOMM20P2-201ENST00000540082 421 ntBASIC4.41□□□□□ -1.7
TNFP01375 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.41□□□□□ -1.7
TNFP01375 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.41□□□□□ -1.7
TNFP01375 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.41□□□□□ -1.7
TNFP01375 KPNA2P3-201ENST00000584190 848 ntBASIC4.41□□□□□ -1.7
TNFP01375 AC012557.1-201ENST00000607115 611 ntBASIC4.41□□□□□ -1.7
TNFP01375 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.41□□□□□ -1.7
TNFP01375 MIR6716-201ENST00000613413 80 ntBASIC4.41□□□□□ -1.7
TNFP01375 AC114781.5-201ENST00000615297 108 ntBASIC4.41□□□□□ -1.7
TNFP01375 BNIP3P41-202ENST00000616656 861 ntBASIC4.41□□□□□ -1.7
TNFP01375 OR2L1P-202ENST00000641567 1023 ntBASIC4.41□□□□□ -1.7
TNFP01375 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TNFP01375 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TNFP01375 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TNFP01375 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.41□□□□□ -1.7
TNFP01375 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TNFP01375 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.41□□□□□ -1.7
TNFP01375 AC104260.2-201ENST00000623551 3497 ntBASIC4.41□□□□□ -1.7
TNFP01375 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TNFP01375 AC090017.1-201ENST00000548612 1779 ntBASIC4.4□□□□□ -1.7
TNFP01375 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TNFP01375 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
TNFP01375 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.4□□□□□ -1.7
TNFP01375 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TNFP01375 OR6C69P-201ENST00000394268 893 ntBASIC4.4□□□□□ -1.71
TNFP01375 FCF1P5-201ENST00000406490 482 ntBASIC4.4□□□□□ -1.71
TNFP01375 AC002524.1-201ENST00000411687 547 ntBASIC4.4□□□□□ -1.71
TNFP01375 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.4□□□□□ -1.71
TNFP01375 NPM1P26-201ENST00000426339 738 ntBASIC4.4□□□□□ -1.71
TNFP01375 RSL24D1P6-201ENST00000426934 401 ntBASIC4.4□□□□□ -1.71
TNFP01375 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.4□□□□□ -1.71
TNFP01375 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.4□□□□□ -1.71
TNFP01375 RPL7P33-201ENST00000444159 742 ntBASIC4.4□□□□□ -1.71
TNFP01375 AL157385.1-201ENST00000446973 268 ntBASIC4.4□□□□□ -1.71
TNFP01375 RPS27AP17-201ENST00000463344 455 ntBASIC4.4□□□□□ -1.71
TNFP01375 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.4□□□□□ -1.71
TNFP01375 AC015912.2-201ENST00000571053 181 ntBASIC4.4□□□□□ -1.71
TNFP01375 MIR3939-201ENST00000582614 106 ntBASIC4.4□□□□□ -1.71
TNFP01375 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TNFP01375 BPIFA4P-203ENST00000603168 689 ntBASIC4.4□□□□□ -1.71
TNFP01375 COX6CP4-201ENST00000605798 228 ntBASIC4.4□□□□□ -1.71
TNFP01375 AC008966.2-201ENST00000606157 453 ntBASIC4.4□□□□□ -1.71
TNFP01375 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.4□□□□□ -1.71
TNFP01375 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.4□□□□□ -1.71
TNFP01375 AC009704.2-201ENST00000618739 483 ntBASIC4.4□□□□□ -1.71
TNFP01375 CCT8P1-201ENST00000413611 1657 ntBASIC4.4□□□□□ -1.71
TNFP01375 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.4□□□□□ -1.71
TNFP01375 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TNFP01375 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TNFP01375 AP000756.2-201ENST00000624168 2567 ntBASIC4.4□□□□□ -1.71
TNFP01375 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TNFP01375 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TNFP01375 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TNFP01375 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.39□□□□□ -1.71
TNFP01375 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
TNFP01375 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.39□□□□□ -1.71
TNFP01375 AC009951.1-201ENST00000623674 2614 ntBASIC4.39□□□□□ -1.71
TNFP01375 OR5P1P-201ENST00000299512 925 ntBASIC4.39□□□□□ -1.71
TNFP01375 RNU1-83P-201ENST00000363426 164 ntBASIC4.39□□□□□ -1.71
TNFP01375 UBBP2-201ENST00000376781 231 ntBASIC4.39□□□□□ -1.71
TNFP01375 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.39□□□□□ -1.71
TNFP01375 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.39□□□□□ -1.71
TNFP01375 OR2AH1P-201ENST00000425717 928 ntBASIC4.39□□□□□ -1.71
TNFP01375 GSTA7P-201ENST00000438425 448 ntBASIC4.39□□□□□ -1.71
TNFP01375 NPM1P33-201ENST00000438918 872 ntBASIC4.39□□□□□ -1.71
TNFP01375 TDGF1P1-201ENST00000445734 527 ntBASIC4.39□□□□□ -1.71
TNFP01375 SEPT7P3-201ENST00000455017 621 ntBASIC4.39□□□□□ -1.71
TNFP01375 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.39□□□□□ -1.71
TNFP01375 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TNFP01375 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
TNFP01375 PSMB7P1-201ENST00000556349 514 ntBASIC4.39□□□□□ -1.71
TNFP01375 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.39□□□□□ -1.71
TNFP01375 MIR4472-2-201ENST00000582069 67 ntBASIC4.39□□□□□ -1.71
TNFP01375 AP005262.1-201ENST00000582646 997 ntBASIC4.39□□□□□ -1.71
TNFP01375 MIR3936-201ENST00000584304 110 ntBASIC4.39□□□□□ -1.71
TNFP01375 AC091178.1-203ENST00000584586 279 ntBASIC4.39□□□□□ -1.71
TNFP01375 MIR3138-201ENST00000585238 82 ntBASIC4.39□□□□□ -1.71
TNFP01375 HMGB2P1-201ENST00000591146 634 ntBASIC4.39□□□□□ -1.71
TNFP01375 IPO5P1-202ENST00000600039 287 ntBASIC4.39□□□□□ -1.71
TNFP01375 AC092653.1-201ENST00000608509 531 ntBASIC4.39□□□□□ -1.71
TNFP01375 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms