Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 OR4A2P-201ENST00000527276 913 ntBASIC4.85□□□□□ -1.63
RTCAO00442 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.85□□□□□ -1.63
RTCAO00442 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.85□□□□□ -1.63
RTCAO00442 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.85□□□□□ -1.63
RTCAO00442 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.85□□□□□ -1.63
RTCAO00442 SUMO2P15-201ENST00000604285 278 ntBASIC4.85□□□□□ -1.63
RTCAO00442 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.85□□□□□ -1.63
RTCAO00442 AC020923.1-201ENST00000624021 917 ntBASIC4.85□□□□□ -1.63
RTCAO00442 AC106730.3-201ENST00000624568 641 ntBASIC4.85□□□□□ -1.63
RTCAO00442 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.85□□□□□ -1.63
RTCAO00442 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTCAO00442 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.85□□□□□ -1.63
RTCAO00442 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RTCAO00442 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RTCAO00442 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTCAO00442 OR14L1P-202ENST00000641545 3009 ntBASIC4.85□□□□□ -1.63
RTCAO00442 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTCAO00442 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTCAO00442 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.85□□□□□ -1.63
RTCAO00442 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTCAO00442 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.84□□□□□ -1.63
RTCAO00442 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.84□□□□□ -1.63
RTCAO00442 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RTCAO00442 AC092376.2-201ENST00000622621 4116 ntBASIC4.84□□□□□ -1.63
RTCAO00442 AL136964.1-201ENST00000622038 2990 ntBASIC4.84□□□□□ -1.63
RTCAO00442 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.84□□□□□ -1.63
RTCAO00442 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.84□□□□□ -1.63
RTCAO00442 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
RTCAO00442 AL590763.1-201ENST00000398297 1545 ntBASIC4.84□□□□□ -1.63
RTCAO00442 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RTCAO00442 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.84□□□□□ -1.63
RTCAO00442 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RTCAO00442 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RTCAO00442 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RTCAO00442 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RTCAO00442 RN7SKP273-201ENST00000411392 314 ntBASIC4.84□□□□□ -1.63
RTCAO00442 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.84□□□□□ -1.63
RTCAO00442 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.84□□□□□ -1.63
RTCAO00442 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.84□□□□□ -1.63
RTCAO00442 MTND4LP14-201ENST00000429447 288 ntBASIC4.84□□□□□ -1.63
RTCAO00442 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.84□□□□□ -1.63
RTCAO00442 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.84□□□□□ -1.63
RTCAO00442 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.84□□□□□ -1.63
RTCAO00442 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.84□□□□□ -1.63
RTCAO00442 BX284632.1-201ENST00000478218 541 ntBASIC4.84□□□□□ -1.63
RTCAO00442 AC011037.1-201ENST00000483964 558 ntBASIC4.84□□□□□ -1.63
RTCAO00442 AC025459.1-201ENST00000504072 156 ntBASIC4.84□□□□□ -1.63
RTCAO00442 AC111193.1-201ENST00000504097 155 ntBASIC4.84□□□□□ -1.63
RTCAO00442 RN7SKP82-201ENST00000516786 223 ntBASIC4.84□□□□□ -1.63
RTCAO00442 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.84□□□□□ -1.63
RTCAO00442 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.84□□□□□ -1.63
RTCAO00442 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.84□□□□□ -1.63
RTCAO00442 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.84□□□□□ -1.63
RTCAO00442 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.84□□□□□ -1.63
RTCAO00442 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.84□□□□□ -1.63
RTCAO00442 AC063949.1-201ENST00000552900 865 ntBASIC4.84□□□□□ -1.63
RTCAO00442 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.84□□□□□ -1.63
RTCAO00442 MTND4LP24-201ENST00000572277 291 ntBASIC4.84□□□□□ -1.63
RTCAO00442 MIR3691-201ENST00000578066 90 ntBASIC4.84□□□□□ -1.63
RTCAO00442 AC127024.5-201ENST00000580085 462 ntBASIC4.84□□□□□ -1.63
RTCAO00442 ZNF92P3-201ENST00000596594 954 ntBASIC4.84□□□□□ -1.63
RTCAO00442 AL023583.1-201ENST00000607518 1143 ntBASIC4.84□□□□□ -1.63
RTCAO00442 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.84□□□□□ -1.63
RTCAO00442 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.84□□□□□ -1.63
RTCAO00442 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.84□□□□□ -1.63
RTCAO00442 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.84□□□□□ -1.63
RTCAO00442 AL163152.1-201ENST00000642001 374 ntBASIC4.84□□□□□ -1.63
RTCAO00442 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.84□□□□□ -1.63
RTCAO00442 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
RTCAO00442 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.84□□□□□ -1.64
RTCAO00442 AC114947.2-201ENST00000565748 2125 ntBASIC4.84□□□□□ -1.64
RTCAO00442 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
RTCAO00442 NEAT1-202ENST00000501122 22743 ntBASIC4.84□□□□□ -1.64
RTCAO00442 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.84□□□□□ -1.64
RTCAO00442 AC025125.1-201ENST00000624743 1922 ntBASIC4.84□□□□□ -1.64
RTCAO00442 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
RTCAO00442 C4BPAP1-201ENST00000415474 1893 ntBASIC4.83□□□□□ -1.64
RTCAO00442 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTCAO00442 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTCAO00442 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTCAO00442 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTCAO00442 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RTCAO00442 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTCAO00442 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTCAO00442 GTF2H2B-203ENST00000508065 1432 ntBASIC4.83□□□□□ -1.64
RTCAO00442 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RTCAO00442 RN7SKP113-201ENST00000363891 295 ntBASIC4.83□□□□□ -1.64
RTCAO00442 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.83□□□□□ -1.64
RTCAO00442 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.83□□□□□ -1.64
RTCAO00442 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.83□□□□□ -1.64
RTCAO00442 FAR1P1-201ENST00000427163 934 ntBASIC4.83□□□□□ -1.64
RTCAO00442 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.83□□□□□ -1.64
RTCAO00442 AC005033.1-201ENST00000428904 813 ntBASIC4.83□□□□□ -1.64
RTCAO00442 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.83□□□□□ -1.64
RTCAO00442 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RTCAO00442 AC021660.1-201ENST00000465006 554 ntBASIC4.83□□□□□ -1.64
RTCAO00442 AC005532.2-201ENST00000467154 373 ntBASIC4.83□□□□□ -1.64
RTCAO00442 HMGB1P21-201ENST00000502313 581 ntBASIC4.83□□□□□ -1.64
RTCAO00442 SNRPCP2-201ENST00000504370 475 ntBASIC4.83□□□□□ -1.64
RTCAO00442 AC010350.1-201ENST00000504908 231 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms