Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC004241.3-201ENST00000611728 517 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 MIR6809-201ENST00000612189 116 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC015819.1-201ENST00000613588 663 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AL118522.2-201ENST00000616045 615 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 MIR6880-201ENST00000622851 62 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 DLD-205ENST00000440410 1993 ntTSL 2 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AP001148.1-201ENST00000624124 2359 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 NCAPGP1-201ENST00000505112 1814 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 RNA5SP301-201ENST00000362537 121 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 RNU2-5P-201ENST00000410533 180 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 RN7SKP206-201ENST00000410823 293 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AC007390.1-201ENST00000415722 356 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 MYB-206ENST00000420123 1051 ntTSL 5 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AC006509.1-201ENST00000420788 634 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 PRELID3BP10-201ENST00000431957 584 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AL031681.1-201ENST00000443304 400 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 GAS5-218ENST00000448718 565 ntTSL 2 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 HMGB1P7-201ENST00000450921 612 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 VN1R32P-201ENST00000452234 905 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 LDHBP2-201ENST00000456969 1005 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 RN7SL738P-201ENST00000470264 297 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AL035404.1-201ENST00000497982 568 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 Vault.1-201ENST00000516474 102 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 IGHVII-49-1-201ENST00000521760 224 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 OR8X1P-201ENST00000534542 869 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AC007956.1-201ENST00000555623 542 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 PDCD6IPP2-207ENST00000566321 1069 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 MIR4266-201ENST00000583300 55 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AL049844.2-201ENST00000604280 628 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AC011891.2-201ENST00000604949 397 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 XIST_intron.1-201ENST00000619444 68 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 CU639417.4-201ENST00000623928 207 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 AL357140.4-201ENST00000636827 412 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 MIR7153-201ENST00000637758 57 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 RIOK3P1-201ENST00000418778 1528 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 GABPAP-201ENST00000419271 1356 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms