Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NEDD8-MDP1E9PL57 AL049830.4-201ENST00000555149 351 ntBASIC4.84□□□□□ -1.63
NEDD8-MDP1E9PL57 AL121839.1-201ENST00000556233 1185 ntBASIC4.84□□□□□ -1.63
NEDD8-MDP1E9PL57 AC027281.1-201ENST00000574178 758 ntBASIC4.84□□□□□ -1.63
NEDD8-MDP1E9PL57 MIR4472-2-201ENST00000582069 67 ntBASIC4.84□□□□□ -1.63
NEDD8-MDP1E9PL57 MIR6758-201ENST00000620653 63 ntBASIC4.84□□□□□ -1.63
NEDD8-MDP1E9PL57 AL118508.4-201ENST00000624142 1176 ntBASIC4.84□□□□□ -1.63
NEDD8-MDP1E9PL57 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.84□□□□□ -1.63
NEDD8-MDP1E9PL57 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NEDD8-MDP1E9PL57 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
NEDD8-MDP1E9PL57 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.84□□□□□ -1.63
NEDD8-MDP1E9PL57 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.84□□□□□ -1.64
NEDD8-MDP1E9PL57 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.84□□□□□ -1.64
NEDD8-MDP1E9PL57 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
NEDD8-MDP1E9PL57 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.64
NEDD8-MDP1E9PL57 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
NEDD8-MDP1E9PL57 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 AC092111.2-201ENST00000611627 1414 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 MTHFD2P5-201ENST00000320415 844 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 IGKV7-3-201ENST00000357453 298 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 RNU6-618P-201ENST00000363518 112 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 AC007738.1-201ENST00000413892 348 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 OR13Z1P-201ENST00000416141 834 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 RPL23AP1-201ENST00000428990 471 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 AC034205.1-201ENST00000520621 638 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 AP000859.1-201ENST00000525536 307 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 AC009643.1-201ENST00000532030 391 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 AC105129.1-201ENST00000560250 297 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 MIR4284-201ENST00000578924 81 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 RPL12P25-202ENST00000598100 674 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 AC012467.1-201ENST00000607740 256 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 AC009032.1-201ENST00000617574 431 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 LINC01355-201ENST00000566551 5444 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 AL137100.1-201ENST00000556703 1620 ntBASIC4.83□□□□□ -1.64
NEDD8-MDP1E9PL57 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 RPL32P3-201ENST00000359025 275 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 TRIM60P17-201ENST00000415181 719 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 GLUD1P9-201ENST00000420997 1173 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 ARAFP1-201ENST00000422172 605 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 RGS17P1-201ENST00000423358 553 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 RPL18P10-201ENST00000425606 538 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 MTCO1P57-201ENST00000432182 261 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 AC007688.1-201ENST00000475592 759 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 AP001781.1-201ENST00000530977 207 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 MIR4277-201ENST00000578298 84 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 AC069061.3-201ENST00000582254 823 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 MIR4697-201ENST00000582977 78 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 AL133338.2-201ENST00000604292 736 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 QTRT1P1-201ENST00000604344 1078 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 KATNBL1P1-201ENST00000605192 748 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 AC067838.1-201ENST00000606064 577 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 AC003001.2-201ENST00000616294 831 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 AC004232.3-201ENST00000622977 525 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 AC006453.5-201ENST00000636451 619 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms