Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AL022331.1-201ENST00000429025 477 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 RPL17P35-201ENST00000432217 549 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 FABP5P3-201ENST00000437960 408 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 VN1R110P-201ENST00000438988 971 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 SNRPGP5-201ENST00000456003 220 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 RPL7P6-201ENST00000480903 738 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 RPL21P47-201ENST00000483696 477 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AC073073.1-201ENST00000493920 463 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AC093755.1-201ENST00000512950 1023 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AC016065.2-201ENST00000514530 444 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 HIGD1AP3-201ENST00000515857 278 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AC104115.2-201ENST00000523026 687 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AC091304.5-201ENST00000568969 158 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 FAM27E4-201ENST00000605259 342 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 VN1R9P-201ENST00000614184 867 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AC005840.5-201ENST00000619166 599 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AC211486.4-201ENST00000621495 113 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AC020978.9-201ENST00000624380 1141 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 PNPT1P2-201ENST00000456768 2050 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 AC107081.3-201ENST00000612715 2034 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 SNORA51.12-201ENST00000384448 134 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 MIR551A-201ENST00000385042 96 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 ENSAP1-201ENST00000392855 326 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 RPS24P12-201ENST00000402084 394 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 AL513175.1-201ENST00000431492 780 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 RAB11AP1-201ENST00000442978 646 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 AC009963.2-201ENST00000453431 138 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 FGF7P3-201ENST00000454645 303 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 AL035090.1-201ENST00000454835 332 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 AC112206.1-201ENST00000468416 477 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 AC087672.1-201ENST00000479876 766 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 KRT19P6-201ENST00000510983 209 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 RNA5SP464-201ENST00000516251 108 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 AP003396.4-201ENST00000527574 265 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 AP003717.3-201ENST00000544832 1180 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 AC074029.1-201ENST00000552531 1044 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 AC023824.3-201ENST00000569003 562 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 BNIP3P4-201ENST00000604946 565 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 HMGN2P28-201ENST00000606102 262 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 AC108673.3-201ENST00000609183 335 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 EIF3FP1-201ENST00000613970 806 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 FO681491.1-202ENST00000623392 737 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 AC020923.1-201ENST00000624021 917 ntBASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB1P1B2RPK0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms