Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MGAT2P2-201ENST00000427194 797 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC073143.1-201ENST00000436316 395 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 UBE2D3P1-201ENST00000436669 444 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 SUMO2P3-201ENST00000438311 288 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 FGF7P5-201ENST00000441829 291 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 RPL23AP60-201ENST00000450011 454 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 YWHAEP1-201ENST00000453697 763 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 RPL5P24-201ENST00000463742 885 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC082651.2-201ENST00000496833 166 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 RN7SL284P-201ENST00000498823 275 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 DYNLL1P6-201ENST00000503440 264 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 MTND1P22-201ENST00000510572 951 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 RNU6-1129P-201ENST00000515964 104 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC027308.1-201ENST00000517993 110 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC135279.1-201ENST00000543493 504 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC093591.2-201ENST00000565254 3843 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 MIR4443-201ENST00000585052 53 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 Z99497.2-201ENST00000603634 310 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC009220.3-201ENST00000604318 586 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC005252.1-201ENST00000604518 1063 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AP004247.3-201ENST00000608682 624 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AL450489.1-201ENST00000612071 468 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC234782.5-201ENST00000617723 324 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC005840.5-201ENST00000619166 599 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AC005539.1-201ENST00000443768 1479 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AC079753.1-201ENST00000623243 3868 ntBASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AL512646.1-201ENST00000269395 1077 ntBASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 RNU6-619P-201ENST00000365146 108 ntBASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 RN7SKP166-201ENST00000410812 305 ntBASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 MTND1P32-201ENST00000433043 938 ntBASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 USP24P1-201ENST00000433802 779 ntBASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 RNU6-1218P-201ENST00000458990 108 ntBASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 RN7SL629P-201ENST00000489622 285 ntBASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 RN7SL57P-201ENST00000493687 290 ntBASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 WBP1LP4-201ENST00000505043 344 ntBASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 OR4C2P-201ENST00000530855 1064 ntBASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 TXNP4-201ENST00000575018 310 ntBASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AL109653.1-201ENST00000603091 248 ntBASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AL139407.1-201ENST00000613826 1175 ntBASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA3Q9Y5H0 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms