Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 SDAD1P1-202ENST00000524156 2051 ntBASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 RNA5SP52-201ENST00000362448 134 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 RN7SKP216-201ENST00000411050 312 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 CASKP1-201ENST00000412870 582 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 BRWD1P3-201ENST00000428816 390 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 OR1H1P-201ENST00000448731 937 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 RPL32P9-201ENST00000487963 407 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AC025445.1-201ENST00000502728 300 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 RNA5SP154-201ENST00000516193 111 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AC100770.1-201ENST00000532310 322 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AC133555.2-201ENST00000550213 292 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AC009117.1-201ENST00000563948 554 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 MIR4675-201ENST00000577898 77 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 MIR3934-201ENST00000579806 107 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 VN1R81P-201ENST00000602085 372 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AC005520.3-201ENST00000602874 370 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 FAM27B-201ENST00000610601 213 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AC015804.1-201ENST00000622935 435 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 HSPD1P14-201ENST00000432666 1618 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AL121950.1-201ENST00000624993 2077 ntBASIC4.31□□□□□ -1.72
TRAPPC4Q9Y296 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 RNU6-729P-201ENST00000384399 107 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 MIR93-201ENST00000385024 80 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 U3.30-201ENST00000391308 210 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AL035696.2-201ENST00000407941 709 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 RNA5SP113-201ENST00000410486 84 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 RNA5SP104-201ENST00000410989 118 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 RPS26P13-201ENST00000419030 330 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AL645608.4-201ENST00000423619 154 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 NRBF2P3-201ENST00000432731 865 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AC104651.2-201ENST00000447549 528 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 NDUFA5P12-201ENST00000503796 343 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 BRD9P1-201ENST00000529855 560 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 OR5D15P-201ENST00000531671 942 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 MIR4737-201ENST00000583979 81 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 QTRT1P1-201ENST00000604344 1078 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AL391358.1-201ENST00000605342 190 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms