Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC104971.1-201ENST00000495117 578 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 RN7SKP276-201ENST00000516242 268 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AC027449.1-201ENST00000608890 407 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AP000943.4-201ENST00000622912 357 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AC008079.2-201ENST00000623543 20396 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AC010928.1-201ENST00000592477 1447 ntBASIC5.15□□□□□ -1.58
SIX4Q9UIU6 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SIX4Q9UIU6 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SIX4Q9UIU6 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SIX4Q9UIU6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.15□□□□□ -1.58
SIX4Q9UIU6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
SIX4Q9UIU6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SIX4Q9UIU6 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SIX4Q9UIU6 AC053481.2-202ENST00000582394 1500 ntBASIC5.15□□□□□ -1.58
SIX4Q9UIU6 RNU6-650P-201ENST00000365658 111 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 ARL4AP5-201ENST00000404372 599 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 TMBIM7P-201ENST00000418074 855 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC234781.4-201ENST00000419384 244 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC092570.3-201ENST00000420113 693 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC073310.1-201ENST00000423226 1033 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 OR5M12P-201ENST00000423388 929 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AL451139.1-201ENST00000434718 346 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 CLIC4P1-201ENST00000453177 535 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 MTATP6P14-201ENST00000455189 673 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 MTND2P6-201ENST00000455337 1030 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 MTCO1P31-201ENST00000506355 492 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 RNU6-319P-201ENST00000516025 108 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC067904.2-201ENST00000517322 1283 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC103833.1-201ENST00000517442 172 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC105129.1-201ENST00000560250 297 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC004775.1-201ENST00000607389 753 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 OR8G7P-201ENST00000616658 848 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 MIR7703-201ENST00000620784 77 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AL356118.1-201ENST00000635272 1078 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AL022322.2-201ENST00000624072 20397 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC112198.2-201ENST00000426589 6996 ntBASIC5.15□□□□□ -1.59
SIX4Q9UIU6 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SIX4Q9UIU6 AC092111.2-201ENST00000611627 1414 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AP005435.3-201ENST00000531260 3198 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 HSPA8P14-201ENST00000552265 1805 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AC097461.1-201ENST00000568928 2821 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AC008549.2-201ENST00000333482 706 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AC017079.1-201ENST00000333650 415 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 RNU6-792P-201ENST00000363490 107 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 RNU1-82P-201ENST00000390851 165 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 ATP5F1P6-201ENST00000402768 767 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 BX510359.2-201ENST00000417920 305 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 GLUD1P9-201ENST00000420997 1173 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 FABP7P1-201ENST00000424004 391 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AC011005.3-201ENST00000491624 395 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 HAUS1P1-201ENST00000505275 832 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms