Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RIMBP3Q9UFD9 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
RIMBP3Q9UFD9 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 AC010168.2-201ENST00000562691 5428 ntBASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 OR4A15-201ENST00000314706 1035 ntBASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 UBBP2-201ENST00000376781 231 ntBASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 RN7SKP235-201ENST00000410662 305 ntBASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 AC108032.1-201ENST00000416706 207 ntBASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 AL159987.2-201ENST00000432754 307 ntBASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 PTMAP3-201ENST00000447474 330 ntBASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 AC098799.3-201ENST00000506095 438 ntBASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 AC010608.2-201ENST00000624830 470 ntBASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 AC000095.2-202ENST00000637415 154 ntBASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.06□□□□□ -1.28
RIMBP3Q9UFD9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 RPL7P28-201ENST00000437739 740 ntBASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 AC138907.8-201ENST00000623981 2256 ntBASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 RNU1-14P-201ENST00000362759 152 ntBASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 RNU11-4P-201ENST00000391149 133 ntBASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 RGS17P1-201ENST00000423358 553 ntBASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 AC104306.1-201ENST00000449702 371 ntBASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 RN7SL429P-201ENST00000479090 223 ntBASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 RN7SL489P-201ENST00000486185 223 ntBASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 RN7SL327P-201ENST00000488659 223 ntBASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 WBP1LP4-201ENST00000505043 344 ntBASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 MIR4433B-201ENST00000581329 102 ntBASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 FAM27D1-201ENST00000612308 341 ntBASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 RN7SL853P-201ENST00000617250 223 ntBASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RIMBP3Q9UFD9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 AL355834.1-201ENST00000556602 3965 ntBASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 AL049781.1-201ENST00000623195 3585 ntBASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 RPL6P29-201ENST00000414863 865 ntBASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 AL157831.1-201ENST00000426134 473 ntBASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 AL606490.9-201ENST00000603331 271 ntBASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 AL354798.1-201ENST00000622505 329 ntBASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 AP001642.1-201ENST00000624727 2117 ntBASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 AC006453.5-201ENST00000636451 619 ntBASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RIMBP3Q9UFD9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC7.03□□□□□ -1.28
RIMBP3Q9UFD9 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
RIMBP3Q9UFD9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RIMBP3Q9UFD9 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RIMBP3Q9UFD9 BX276092.6-201ENST00000430476 250 ntBASIC7.03□□□□□ -1.28
RIMBP3Q9UFD9 BX276092.8-201ENST00000455722 250 ntBASIC7.03□□□□□ -1.28
RIMBP3Q9UFD9 RNU1-95P-201ENST00000516357 160 ntBASIC7.03□□□□□ -1.28
RIMBP3Q9UFD9 RNU1-128P-201ENST00000516704 160 ntBASIC7.03□□□□□ -1.28
RIMBP3Q9UFD9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC7.03□□□□□ -1.28
RIMBP3Q9UFD9 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.03□□□□□ -1.28
RIMBP3Q9UFD9 CR392039.4-201ENST00000624968 501 ntBASIC7.03□□□□□ -1.28
RIMBP3Q9UFD9 AC009779.8-201ENST00000641684 4384 ntBASIC7.03□□□□□ -1.28
RIMBP3Q9UFD9 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms