Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VPS29Q9UBQ0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 RNU1-44P-201ENST00000384453 163 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 RNU6-1320P-201ENST00000390838 107 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 RNU6-1269P-201ENST00000391139 107 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 HDGFP1-201ENST00000405943 252 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 OR51A6P-201ENST00000418680 1004 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 YWHAZP2-201ENST00000440317 728 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AC012671.1-201ENST00000451912 203 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 RNU6-599P-201ENST00000459383 107 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 RNU6-1193P-201ENST00000459461 107 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AC090013.1-201ENST00000485147 480 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AGGF1P3-201ENST00000493675 1213 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AC096553.1-201ENST00000605169 829 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AC026979.4-201ENST00000606555 645 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 AL353726.1-201ENST00000614041 1000 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 RNU6-368P-201ENST00000620928 107 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 RNU6-538P-201ENST00000622329 107 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 CPHL1P-201ENST00000461341 3407 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 OR14L1P-202ENST00000641545 3009 ntBASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
VPS29Q9UBQ0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 AP001273.1-201ENST00000624493 3152 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 OR51H2P-202ENST00000641424 3046 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 RNA5SP87-201ENST00000384155 118 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 RNU6-729P-201ENST00000384399 107 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 AC013470.3-201ENST00000420252 1194 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 RPS12P10-201ENST00000427031 377 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 RPL23AP93-201ENST00000440847 484 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 VN1R32P-201ENST00000452234 905 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 AC107015.1-201ENST00000466902 747 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 AC092905.1-201ENST00000467527 949 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 AC006967.1-201ENST00000467608 589 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 IGLV2-34-201ENST00000490007 283 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 ARL4AP1-201ENST00000503220 705 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 OR7H2P-201ENST00000513483 306 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 AC018442.3-201ENST00000523025 183 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 OR5M2P-201ENST00000529003 936 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 AC090181.2-201ENST00000602975 672 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 LINC01808-202ENST00000641680 1116 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 AC006971.1-201ENST00000407916 4486 ntBASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VPS29Q9UBQ0 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms