Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CYCSP38-201ENST00000559840 322 ntBASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 GTF2IP8-201ENST00000560687 584 ntBASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 AL390816.3-201ENST00000604527 1066 ntBASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 AC122133.1-201ENST00000613964 233 ntBASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 MIR6811-201ENST00000620409 58 ntBASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 AC073530.2-201ENST00000623987 261 ntBASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 SNORA17.5-201ENST00000630429 132 ntBASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 AC116618.1-201ENST00000634617 774 ntBASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 AC011416.1-201ENST00000514947 1732 ntBASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 PWAR1-201ENST00000624188 2414 ntBASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.64□□□□□ -1.51
CCM2LQ9NUG4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AL133243.2-201ENST00000610331 1621 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 RN7SKP185-201ENST00000362813 326 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 RNU6-931P-201ENST00000363850 107 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 RNU6-304P-201ENST00000364855 107 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 RPL11P3-201ENST00000395256 523 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 DPPA2P2-201ENST00000418220 897 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC019050.1-201ENST00000418508 492 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC079355.1-201ENST00000421770 223 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 Z93242.1-201ENST00000427102 353 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 CRIP1P1-201ENST00000427567 185 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC007559.1-201ENST00000428736 355 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 PNKDP1-201ENST00000435914 430 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC118469.1-201ENST00000442943 488 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 MED28P3-201ENST00000444288 531 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC023271.1-201ENST00000445936 1090 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 RPS23P9-201ENST00000448848 438 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 SDC4P-201ENST00000453285 601 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 SEPT7P3-201ENST00000455017 621 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 SYPL1P1-201ENST00000473622 768 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC005912.1-201ENST00000495392 255 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC091435.1-201ENST00000505442 584 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 OR7E99P-201ENST00000505750 922 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC006499.4-201ENST00000510947 694 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 KHDC1P1-201ENST00000511053 508 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 HNRNPKP5-201ENST00000515300 253 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 Y_RNA.710-201ENST00000516975 110 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC090424.1-201ENST00000535243 736 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AL121594.2-201ENST00000541658 472 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC006530.1-201ENST00000555980 571 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC068714.1-201ENST00000559623 800 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 MIR4999-201ENST00000585029 91 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AL137072.1-201ENST00000603444 466 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AL590229.1-201ENST00000603497 542 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC124312.6-202ENST00000623624 418 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AP003072.4-201ENST00000624580 310 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AC239868.2-201ENST00000564237 4527 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AP000526.1-201ENST00000603308 1388 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms