Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 AC140479.3-201ENST00000418944 1126 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 RPL19P16-201ENST00000433839 588 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 PTMAP3-201ENST00000447474 330 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 AC069306.1-201ENST00000507006 843 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 AC090246.1-201ENST00000616499 426 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 uc_338.7-201ENST00000621834 124 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 SNORA71.2-201ENST00000364941 134 ntBASIC4.28□□□□□ -1.72
CHD8Q9HCK8 HMGB1P18-201ENST00000438801 619 ntBASIC4.28□□□□□ -1.72
CHD8Q9HCK8 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 RPL12P22-201ENST00000519073 490 ntBASIC4.28□□□□□ -1.72
CHD8Q9HCK8 AP000827.1-201ENST00000527814 258 ntBASIC4.28□□□□□ -1.72
CHD8Q9HCK8 AC135507.2-201ENST00000612443 309 ntBASIC4.28□□□□□ -1.72
CHD8Q9HCK8 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 DMD-211ENST00000378707 7410 ntTSL 5 BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 PPIAP3-201ENST00000450588 505 ntBASIC4.28□□□□□ -1.72
CHD8Q9HCK8 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD8Q9HCK8 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 RNU1-132P-201ENST00000364300 164 ntBASIC4.27□□□□□ -1.73
CHD8Q9HCK8 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 RPL23AP43-201ENST00000446445 471 ntBASIC4.27□□□□□ -1.73
CHD8Q9HCK8 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 AC091868.1-201ENST00000508746 304 ntBASIC4.27□□□□□ -1.73
CHD8Q9HCK8 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 AC011815.3-201ENST00000624194 473 ntBASIC4.27□□□□□ -1.73
CHD8Q9HCK8 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 AP000473.2-201ENST00000602659 1537 ntBASIC4.27□□□□□ -1.73
CHD8Q9HCK8 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 SRP72P2-201ENST00000344851 1979 ntBASIC4.27□□□□□ -1.73
CHD8Q9HCK8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 MIR3651-201ENST00000630427 90 ntBASIC4.27□□□□□ -1.73
CHD8Q9HCK8 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.27□□□□□ -1.73
CHD8Q9HCK8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms