Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 SEC11B-201ENST00000518383 499 ntBASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 AC104997.1-201ENST00000519761 717 ntBASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 AC018442.3-201ENST00000523025 183 ntBASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 AC068446.1-201ENST00000556425 1549 ntBASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 NDUFB4P11-201ENST00000560510 395 ntBASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 AC093849.1-201ENST00000563631 2209 ntBASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 MIR3160-1-201ENST00000577972 85 ntBASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 MIR1254-2-201ENST00000579553 63 ntBASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 AL121873.1-201ENST00000616013 524 ntBASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 AP000756.2-201ENST00000624168 2567 ntBASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 ABCC13-202ENST00000463099 3842 ntBASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.1□□□□□ -1.59
NECTIN4Q96NY8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 AC025574.1-201ENST00000554784 1653 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 AC087565.3-202ENST00000642085 1603 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 OR51C1P-202ENST00000641159 1444 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 FAM3C2-201ENST00000312214 681 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 GLUD1P9-201ENST00000420997 1173 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 RPL19P16-201ENST00000433839 588 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 MAPRE1P3-201ENST00000435438 796 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 AC002553.2-201ENST00000453217 340 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 HMGB1P4-201ENST00000455362 567 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 RNA5SP464-201ENST00000516251 108 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 AC138701.1-201ENST00000524329 714 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 CD24P2-201ENST00000565486 219 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 AC009852.2-201ENST00000567898 485 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 AC104307.1-201ENST00000616142 196 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 AL049794.2-201ENST00000616301 365 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 AC106730.3-201ENST00000624568 641 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 HPVC1-201ENST00000629899 1198 ntBASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.09□□□□□ -1.59
NECTIN4Q96NY8 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
NECTIN4Q96NY8 AC009951.1-201ENST00000623674 2614 ntBASIC5.09□□□□□ -1.6
NECTIN4Q96NY8 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NECTIN4Q96NY8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 AL121950.1-201ENST00000624993 2077 ntBASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 U3.30-201ENST00000391308 210 ntBASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 TXNP5-201ENST00000441043 315 ntBASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 AC104971.1-201ENST00000495117 578 ntBASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 RNA5SP230-201ENST00000517039 122 ntBASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 AC022726.1-201ENST00000587475 207 ntBASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 MIR6133-201ENST00000617057 108 ntBASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 AL035461.2-201ENST00000619201 524 ntBASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 OR52H1-202ENST00000641796 1061 ntBASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms