Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.92□□□□□ -1.46
HPS3Q969F9 AC093311.1-201ENST00000506586 2021 ntBASIC5.92□□□□□ -1.46
HPS3Q969F9 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HPS3Q969F9 HSPA8P14-201ENST00000552265 1805 ntBASIC5.92□□□□□ -1.46
HPS3Q969F9 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
HPS3Q969F9 AC093591.2-201ENST00000565254 3843 ntBASIC5.92□□□□□ -1.46
HPS3Q969F9 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HPS3Q969F9 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.92□□□□□ -1.46
HPS3Q969F9 CASC19-248ENST00000641674 1356 ntBASIC5.92□□□□□ -1.46
HPS3Q969F9 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.91□□□□□ -1.46
HPS3Q969F9 RBPJP2-201ENST00000618187 1444 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.91□□□□□ -1.46
HPS3Q969F9 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
HPS3Q969F9 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HPS3Q969F9 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HPS3Q969F9 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HPS3Q969F9 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HPS3Q969F9 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HPS3Q969F9 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
HPS3Q969F9 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.91□□□□□ -1.46
HPS3Q969F9 RNU6-543P-201ENST00000362576 108 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HPS3Q969F9 RNU6-225P-201ENST00000384613 103 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 RNA5SP241-201ENST00000391326 114 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AC092745.2-202ENST00000411880 369 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AL390774.1-201ENST00000411924 246 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 GTF2IP5-201ENST00000414608 731 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.91□□□□□ -1.46
HPS3Q969F9 GTF2IP2-201ENST00000424290 697 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.91□□□□□ -1.46
HPS3Q969F9 YWHAEP5-201ENST00000431545 765 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 CYCSP6-201ENST00000434498 302 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.91□□□□□ -1.46
HPS3Q969F9 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.91□□□□□ -1.46
HPS3Q969F9 MTND1P31-201ENST00000449206 961 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.91□□□□□ -1.46
HPS3Q969F9 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.91□□□□□ -1.46
HPS3Q969F9 AC090602.1-201ENST00000469695 252 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HPS3Q969F9 AC010627.1-201ENST00000503819 1294 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.91□□□□□ -1.46
HPS3Q969F9 AC008565.1-201ENST00000509046 885 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.91□□□□□ -1.46
HPS3Q969F9 RNU6-941P-201ENST00000516346 108 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.91□□□□□ -1.46
HPS3Q969F9 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.91□□□□□ -1.46
HPS3Q969F9 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.91□□□□□ -1.46
HPS3Q969F9 AC126177.5-201ENST00000549599 178 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AL358913.1-201ENST00000554342 121 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.91□□□□□ -1.46
HPS3Q969F9 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.91□□□□□ -1.46
HPS3Q969F9 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.91□□□□□ -1.46
HPS3Q969F9 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.91□□□□□ -1.46
HPS3Q969F9 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.91□□□□□ -1.46
HPS3Q969F9 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.91□□□□□ -1.46
HPS3Q969F9 RPL10P14-201ENST00000565265 298 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.91□□□□□ -1.46
HPS3Q969F9 RN7SL356P-201ENST00000582228 248 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.91□□□□□ -1.46
HPS3Q969F9 ZNF92P3-201ENST00000596594 954 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 NIFKP6-201ENST00000598115 845 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.91□□□□□ -1.46
HPS3Q969F9 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.91□□□□□ -1.46
HPS3Q969F9 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.91□□□□□ -1.46
HPS3Q969F9 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
HPS3Q969F9 VN1R74P-201ENST00000613259 503 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.91□□□□□ -1.46
HPS3Q969F9 AC022467.1-201ENST00000614738 749 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AC079395.3-201ENST00000615161 484 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AC010975.3-201ENST00000618727 978 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 AC109454.4-201ENST00000623411 649 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.91□□□□□ -1.46
HPS3Q969F9 AC136428.4-201ENST00000634254 1155 ntBASIC5.91□□□□□ -1.46
HPS3Q969F9 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
HPS3Q969F9 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HPS3Q969F9 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
HPS3Q969F9 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
HPS3Q969F9 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
HPS3Q969F9 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
HPS3Q969F9 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HPS3Q969F9 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.91□□□□□ -1.46
HPS3Q969F9 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.91□□□□□ -1.46
HPS3Q969F9 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HPS3Q969F9 AC100871.1-201ENST00000507871 1456 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HPS3Q969F9 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
HPS3Q969F9 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HPS3Q969F9 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.9□□□□□ -1.46
HPS3Q969F9 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
HPS3Q969F9 MTCO1P56-201ENST00000401674 224 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 TAF13P2-201ENST00000416876 286 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.9□□□□□ -1.46
HPS3Q969F9 MTCO2P21-201ENST00000419780 677 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.9□□□□□ -1.46
HPS3Q969F9 RPL7AP49-201ENST00000429522 581 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 AL591438.1-201ENST00000433508 581 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 RPL19P16-201ENST00000433839 588 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.9□□□□□ -1.46
HPS3Q969F9 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.9□□□□□ -1.46
HPS3Q969F9 MTCYBP42-201ENST00000444653 1130 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms