Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AC112255.1-201ENST00000624070 2493 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 Y_RNA.62-201ENST00000362840 99 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 SNORD51.1-201ENST00000365405 77 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 VN1R54P-201ENST00000435210 1049 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 RPL7P61-201ENST00000451721 751 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 OR52Y1P-201ENST00000452418 828 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 HIGD1AP8-201ENST00000453927 274 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AC063943.1-201ENST00000465434 453 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 IGLV2-34-201ENST00000490007 283 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 NDUFA5P12-201ENST00000503796 343 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AC010468.3-201ENST00000508225 458 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 RNU6-513P-201ENST00000516104 104 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AP000676.2-201ENST00000529711 301 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 CKS1BP1-201ENST00000555221 240 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AL031320.1-201ENST00000604177 357 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AC013244.1-201ENST00000604279 193 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AL590410.1-201ENST00000617925 333 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AC095038.2-201ENST00000621464 1070 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 AL359757.1-201ENST00000623176 255 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 MTND2P41-201ENST00000637599 773 ntBASIC5.08□□□□□ -1.6
LMO3Q8TAP4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
LMO3Q8TAP4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 AC132825.1-201ENST00000463573 2247 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 AL080315.1-201ENST00000406055 466 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 FABP7P1-201ENST00000424004 391 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 MTCO2P23-201ENST00000425216 680 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 AL645931.1-201ENST00000439737 410 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 RPS26P2-201ENST00000440331 348 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 ELOCP13-201ENST00000443934 329 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 RPL36AP15-201ENST00000444514 266 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 CYCSP34-201ENST00000458172 304 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 RN7SL214P-201ENST00000487317 265 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 AC082651.2-201ENST00000496833 166 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 AC021146.5-201ENST00000503544 545 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 BOLA3P3-201ENST00000505182 232 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 AC119751.5-201ENST00000514077 770 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.07□□□□□ -1.6
LMO3Q8TAP4 MTND3P12-201ENST00000559068 328 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 AC093524.1-201ENST00000564266 1094 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 MIR4737-201ENST00000583979 81 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 FAM60CP-201ENST00000591086 664 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 AC098935.2-201ENST00000604222 466 ntBASIC5.07□□□□□ -1.6
LMO3Q8TAP4 AL391358.1-201ENST00000605342 190 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms