Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 TCP11X3P-202ENST00000514289 1254 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 RN7SL802P-201ENST00000577858 299 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 MIR5699-201ENST00000578903 90 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 AC022726.1-201ENST00000587475 207 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 AC073137.1-201ENST00000605636 634 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 COX6CP4-201ENST00000605798 228 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 FAM27B-201ENST00000610601 213 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 AL512624.1-201ENST00000613638 469 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 MIR6886-201ENST00000619864 61 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 OR2AM1P-201ENST00000422137 422 ntBASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 RPS12P5-201ENST00000423449 371 ntBASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 RBMY2QP-201ENST00000429799 1147 ntBASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 TRY2P-201ENST00000448860 689 ntBASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 AC079168.2-201ENST00000453977 416 ntBASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 OR10G5P-201ENST00000532733 358 ntBASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 AC015912.2-201ENST00000571053 181 ntBASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 AP001521.2-201ENST00000608772 546 ntBASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 MIR6715B-201ENST00000637172 77 ntBASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 IRF5P1-201ENST00000504852 2164 ntBASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLHC1Q8NHS4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 AC108751.5-201ENST00000492880 1336 ntBASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 OR51C1P-202ENST00000641159 1444 ntBASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 RNA5SP123-201ENST00000363244 119 ntBASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 AL590762.2-201ENST00000395798 571 ntBASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 RN7SKP229-201ENST00000410465 302 ntBASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 CYCSP10-201ENST00000417973 294 ntBASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 GTF2IP2-201ENST00000424290 697 ntBASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 RPL23AP4-201ENST00000427757 463 ntBASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 AC074386.1-201ENST00000476560 767 ntBASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 AC004815.1-201ENST00000484185 331 ntBASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 NPM1P52-201ENST00000518264 846 ntBASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.5□□□□□ -1.69
CLHC1Q8NHS4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms