Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 RNA5SP228-201ENST00000516232 133 ntBASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 AC010547.7-201ENST00000570323 333 ntBASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 RN7SL52P-201ENST00000584271 284 ntBASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 AC098935.2-201ENST00000604222 466 ntBASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 AL929601.4-201ENST00000613011 1341 ntBASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 AL355852.1-201ENST00000454081 1771 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 RNU6-178P-201ENST00000384631 104 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 MIR550A3-201ENST00000390735 95 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 RN7SKP199-201ENST00000410325 305 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 BTG3P1-201ENST00000435859 716 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 AC108463.1-201ENST00000450258 347 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 AC092324.1-201ENST00000468671 324 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 RPL5P16-201ENST00000471467 790 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 RN7SL826P-201ENST00000479724 288 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 RPL36AP41-201ENST00000493820 306 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 MTCYBP19-201ENST00000517463 1124 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 KCTD9P6-201ENST00000522306 950 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 AC125612.1-201ENST00000547580 377 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 ADAM3B-201ENST00000569937 840 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 AC022960.2-201ENST00000616300 666 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 AP001273.1-201ENST00000624493 3152 ntBASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC65Q8IXS2 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.15□□□□□ -1.58
CCDC65Q8IXS2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.15□□□□□ -1.58
CCDC65Q8IXS2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.15□□□□□ -1.58
CCDC65Q8IXS2 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 AL590609.2-201ENST00000421430 368 ntBASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 AC007394.1-201ENST00000421941 531 ntBASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 RPL21P43-201ENST00000425440 472 ntBASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 AL590762.4-201ENST00000425885 253 ntBASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 RPL23AP37-201ENST00000479658 549 ntBASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 AC011005.3-201ENST00000491624 395 ntBASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 OR5D15P-201ENST00000531671 942 ntBASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 AC105129.1-201ENST00000560250 297 ntBASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 AC015908.5-201ENST00000623289 343 ntBASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC65Q8IXS2 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 AC135352.1-201ENST00000506173 1418 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 AL590240.1-201ENST00000334118 313 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 RNA5SP87-201ENST00000384155 118 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 MIR921-201ENST00000401133 56 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 ATG4AP1-201ENST00000416893 538 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 CYCSP10-201ENST00000417973 294 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 GAPDHP49-201ENST00000421421 961 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 Z74021.1-201ENST00000423610 407 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms