Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC105254.2-201ENST00000603636 436 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC012557.1-201ENST00000607115 611 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AL162574.1-201ENST00000615702 950 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 RMST_10.1-201ENST00000616309 154 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC092451.3-201ENST00000625067 1343 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AL034549.2-201ENST00000618285 3373 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC006210.2-201ENST00000367074 1545 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 RN7SKP104-201ENST00000362605 328 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC096533.1-201ENST00000411645 353 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 UBE2V1P9-201ENST00000414760 368 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 OR13Z1P-201ENST00000416141 834 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 MTCO2P17-201ENST00000424336 677 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC115285.1-201ENST00000424879 736 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 MTND2P2-201ENST00000434633 945 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 Z80107.1-201ENST00000436830 412 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AL772161.1-201ENST00000439130 476 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 KNOP1P3-201ENST00000446933 426 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 TRY2P-201ENST00000448860 689 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC231760.1-201ENST00000498002 260 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC008427.1-201ENST00000503102 655 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 UBE2V1P12-201ENST00000503954 474 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 CDH12P2-201ENST00000504393 298 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 COX6B1P5-201ENST00000509843 249 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AP001372.4-201ENST00000524889 472 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 OR7E13P-201ENST00000526052 910 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC023825.1-201ENST00000566704 1030 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AP000919.1-202ENST00000581139 1264 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 OR7A19P-201ENST00000608051 733 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC063944.3-201ENST00000609969 533 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 VN1R9P-201ENST00000614184 867 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC084824.4-201ENST00000620106 731 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC006927.2-201ENST00000639256 389 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 MFSD8-213ENST00000641134 1327 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 CASC19-284ENST00000642142 1868 ntBASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN4BQ8IWT1 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.37□□□□□ -1.55
SCN4BQ8IWT1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SCN4BQ8IWT1 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SCN4BQ8IWT1 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SCN4BQ8IWT1 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
SCN4BQ8IWT1 INTS6P1-201ENST00000504674 2530 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms