Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 RN7SKP199-201ENST00000410325 305 ntBASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 EIF4A1P3-201ENST00000411521 244 ntBASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 RPL21P91-201ENST00000429231 479 ntBASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 HMGB3P10-201ENST00000434734 572 ntBASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 RPL10P17-201ENST00000453852 316 ntBASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 ATP5G1P3-201ENST00000463301 410 ntBASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 AC211433.2-201ENST00000608433 387 ntBASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 AC015908.5-201ENST00000623289 343 ntBASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 AC020763.5-201ENST00000623298 430 ntBASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 AL391684.1-202ENST00000641293 1636 ntBASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 AL513548.1-201ENST00000562904 1724 ntBASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDKL3Q8IVW4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 CR383656.5-201ENST00000547616 1340 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 VN2R3P-201ENST00000422626 1412 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 RNU1-20P-201ENST00000363314 162 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 SNORA71.2-201ENST00000364941 134 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AL109941.1-201ENST00000401925 229 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 FCF1P5-201ENST00000406490 482 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 SNORA81-201ENST00000408493 178 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AC092570.3-201ENST00000420113 693 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 PSMD10P3-201ENST00000437000 448 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AC005154.2-201ENST00000438110 379 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 ISCUP1-201ENST00000454451 448 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AC104763.1-201ENST00000475274 360 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 DEFB109F-201ENST00000491870 277 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 RNA5SP446-201ENST00000515955 82 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 RPL7P50-201ENST00000600588 727 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AC023762.1-201ENST00000603280 584 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AC005084.1-201ENST00000605160 304 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 MIR6853-201ENST00000619642 74 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 U3.53-201ENST00000628922 216 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 DDX18P4-201ENST00000511690 1966 ntBASIC4.73□□□□□ -1.65
CDKL3Q8IVW4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 AC027290.2-201ENST00000623210 18662 ntBASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 AC009302.1-201ENST00000417147 390 ntBASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 AC004448.2-201ENST00000422360 586 ntBASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 RPSAP41-201ENST00000439695 860 ntBASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 RPL31P44-201ENST00000447680 377 ntBASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 HIGD1AP8-201ENST00000453927 274 ntBASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 RN7SL41P-201ENST00000476144 297 ntBASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 TCP11X3P-202ENST00000514289 1254 ntBASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 PDCD5P1-201ENST00000543528 309 ntBASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 AC044860.2-201ENST00000561005 179 ntBASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 AC108467.2-201ENST00000617640 1597 ntBASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 CASC19-204ENST00000641001 2055 ntBASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms