Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VRK3Q8IV63 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VRK3Q8IV63 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 AC087516.1-201ENST00000561236 2428 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VRK3Q8IV63 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VRK3Q8IV63 AC009962.1-201ENST00000567327 3813 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AL121839.2-201ENST00000565058 6943 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VRK3Q8IV63 KARSP1-201ENST00000451871 1752 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
VRK3Q8IV63 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 SNORD116.1-201ENST00000365628 92 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 SNORA16A-201ENST00000384342 137 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 Y_RNA.578-201ENST00000390903 88 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 RNU6-932P-201ENST00000391108 106 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 ATF1P1-201ENST00000406040 927 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 RN7SKP273-201ENST00000411392 314 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 SDHDP6-201ENST00000414693 480 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 RPL7P53-201ENST00000421245 739 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AC004074.1-201ENST00000421810 1063 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 PNRC2P1-201ENST00000423940 420 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 AL390119.1-201ENST00000440329 312 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 CYCSP51-201ENST00000443545 318 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AC073909.1-201ENST00000447112 999 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 RAB28P3-201ENST00000448325 597 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AC233982.1-201ENST00000451247 436 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AL359385.1-201ENST00000456509 365 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 RNU7-157P-201ENST00000459600 66 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 RPL7P16-201ENST00000479738 738 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VRK3Q8IV63 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 AC021087.2-201ENST00000504656 1203 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 RNU2-30P-201ENST00000516209 141 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 OR5G4P-201ENST00000525251 760 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 RBM22P12-201ENST00000567098 1255 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 MIR3915-201ENST00000578518 97 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 MIR1273E-201ENST00000581165 102 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 MIR4310-201ENST00000582950 57 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AC107993.1-201ENST00000591343 684 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 AC009237.13-201ENST00000603193 276 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 FO393422.1-201ENST00000603908 708 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 LSM1P2-201ENST00000604911 322 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AL118522.2-201ENST00000616045 615 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AC121761.2-201ENST00000617300 689 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 AC099842.1-201ENST00000619919 596 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 OR1S1-201ENST00000624470 978 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 FP325313.1-201ENST00000638228 703 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VRK3Q8IV63 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VRK3Q8IV63 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VRK3Q8IV63 AL049634.1-201ENST00000453770 1720 ntBASIC5.43□□□□□ -1.54
VRK3Q8IV63 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.43□□□□□ -1.54
VRK3Q8IV63 SGO1P2-201ENST00000429458 1589 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VRK3Q8IV63 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VRK3Q8IV63 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VRK3Q8IV63 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VRK3Q8IV63 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
VRK3Q8IV63 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VRK3Q8IV63 Y_RNA.6-201ENST00000362350 114 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 RN7SKP185-201ENST00000362813 326 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 SNORA17A-201ENST00000391185 133 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 MCTS2P-201ENST00000394552 546 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 GAPDHP42-201ENST00000406848 981 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 RNU2-17P-201ENST00000410290 190 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 FCF1P9-201ENST00000412546 282 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC105402.1-201ENST00000413336 545 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC099670.2-201ENST00000435130 321 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms