Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 SNRPEP3-201ENST00000338402 276 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AL603766.1-201ENST00000407763 664 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 RBMY2KP-201ENST00000418221 992 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC234781.4-201ENST00000419384 244 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 NANOGP6-201ENST00000429190 847 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC018804.1-201ENST00000430381 618 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 HMGB3P10-201ENST00000434734 572 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 MYL6P3-201ENST00000436904 432 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 SDCBPP1-201ENST00000440192 890 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC066616.1-201ENST00000486795 413 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 FGF7P4-201ENST00000509595 295 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC006499.2-201ENST00000513470 337 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 RNU2-46P-201ENST00000517038 113 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 COX6B1P4-201ENST00000519826 484 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 PSMA3P-201ENST00000555485 635 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 ANP32BP1-202ENST00000568553 737 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 H3F3BP2-201ENST00000583907 357 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 MIR4443-201ENST00000585052 53 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 RPL29P33-201ENST00000587474 316 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC063977.7-201ENST00000594454 337 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC104785.1-201ENST00000603220 588 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AL391646.1-201ENST00000603860 190 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AL157899.1-201ENST00000604110 936 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC011816.2-201ENST00000607089 556 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC004241.2-201ENST00000614562 444 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC008121.3-201ENST00000618726 433 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC010325.3-201ENST00000641084 394 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 SAMMSON-227ENST00000642114 1199 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 Z93929.1-201ENST00000418200 1475 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 AL391262.1-201ENST00000556558 1992 ntBASIC7.28□□□□□ -1.24
RNF135Q8IUD6 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RNF135Q8IUD6 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
RNF135Q8IUD6 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 OR11H4-201ENST00000315409 1082 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 Y_RNA.72-201ENST00000362894 103 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 Y_RNA.86-201ENST00000363020 111 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 RANP6-201ENST00000413691 644 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AC244452.1-201ENST00000413798 141 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 SNRPEP10-201ENST00000420249 274 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 PRUNEP1-201ENST00000425846 705 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AL035410.1-201ENST00000427409 427 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 RPS29P14-201ENST00000431518 171 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms