Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 VDAC2P1-201ENST00000399358 958 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 RBMY2KP-201ENST00000418221 992 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC099336.2-201ENST00000422457 254 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AL390879.2-203ENST00000426943 1121 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC092013.1-201ENST00000438795 332 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC092647.2-201ENST00000452998 253 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC099560.2-201ENST00000457554 255 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 TPT1P1-201ENST00000458495 518 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 NPM1P17-201ENST00000479221 602 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 RPL23AP73-201ENST00000492507 471 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC111193.1-201ENST00000504097 155 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AL671862.1-201ENST00000515851 349 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC055764.2-201ENST00000610089 670 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC139769.3-201ENST00000618383 175 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AP001784.1-201ENST00000624107 428 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC011815.3-201ENST00000624194 473 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC024023.1-201ENST00000624530 922 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 FRG1DP-201ENST00000635586 771 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 TCP1P3-201ENST00000414406 1498 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AL022393.1-201ENST00000625142 1677 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AC096656.1-201ENST00000623826 1364 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 MIR92A2-201ENST00000385299 75 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AL109941.1-201ENST00000401925 229 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AL035079.1-201ENST00000405210 287 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AL390316.1-201ENST00000406279 553 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 RPL37P18-201ENST00000411602 243 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 MTCO3P4-201ENST00000419236 787 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 MORF4L1P7-201ENST00000426038 703 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 BX119904.1-201ENST00000432026 348 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AC073648.4-201ENST00000442655 781 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 RPL35AP28-201ENST00000459730 331 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AC104687.1-201ENST00000485829 412 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AC005912.1-201ENST00000495392 255 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AC010627.1-201ENST00000503819 1294 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 RNU6-347P-201ENST00000516658 105 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 RN7SKP260-201ENST00000516907 149 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AC093591.2-201ENST00000565254 3843 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AC011840.5-201ENST00000582125 771 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 BNIP3P35-201ENST00000604530 490 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 RPL21P136-201ENST00000605378 396 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AL445493.3-201ENST00000619568 477 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AL445528.2-201ENST00000620582 470 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AP006248.3-201ENST00000623580 594 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AC015726.3-201ENST00000624501 418 ntBASIC5.22□□□□□ -1.57
PRPF39Q86UA1 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
PRPF39Q86UA1 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms