Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.65□□□□□ -1.51
CTR9Q6PD62 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CTR9Q6PD62 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CTR9Q6PD62 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.65□□□□□ -1.51
CTR9Q6PD62 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
CTR9Q6PD62 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CTR9Q6PD62 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CTR9Q6PD62 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CTR9Q6PD62 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CTR9Q6PD62 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CTR9Q6PD62 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.64□□□□□ -1.51
CTR9Q6PD62 AC104118.1-201ENST00000607625 1589 ntBASIC5.64□□□□□ -1.51
CTR9Q6PD62 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CTR9Q6PD62 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CTR9Q6PD62 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CTR9Q6PD62 AL049697.2-201ENST00000403708 294 ntBASIC5.64□□□□□ -1.51
CTR9Q6PD62 AL121834.1-202ENST00000404494 277 ntBASIC5.64□□□□□ -1.51
CTR9Q6PD62 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTR9Q6PD62 HMGB3P9-201ENST00000441799 583 ntBASIC5.64□□□□□ -1.51
CTR9Q6PD62 AC079168.2-201ENST00000453977 416 ntBASIC5.64□□□□□ -1.51
CTR9Q6PD62 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.64□□□□□ -1.51
CTR9Q6PD62 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.64□□□□□ -1.51
CTR9Q6PD62 AC107918.3-201ENST00000533272 382 ntBASIC5.64□□□□□ -1.51
CTR9Q6PD62 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.64□□□□□ -1.51
CTR9Q6PD62 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.64□□□□□ -1.51
CTR9Q6PD62 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.64□□□□□ -1.51
CTR9Q6PD62 AC009303.3-201ENST00000591103 736 ntBASIC5.64□□□□□ -1.51
CTR9Q6PD62 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.64□□□□□ -1.51
CTR9Q6PD62 AC008745.1-201ENST00000604064 271 ntBASIC5.64□□□□□ -1.51
CTR9Q6PD62 AC015914.2-201ENST00000618167 288 ntBASIC5.64□□□□□ -1.51
CTR9Q6PD62 AC012414.7-202ENST00000622705 1090 ntBASIC5.64□□□□□ -1.51
CTR9Q6PD62 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.64□□□□□ -1.51
CTR9Q6PD62 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.64□□□□□ -1.51
CTR9Q6PD62 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CTR9Q6PD62 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTR9Q6PD62 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.64□□□□□ -1.51
CTR9Q6PD62 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CTR9Q6PD62 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CTR9Q6PD62 AC093909.5-201ENST00000621839 1799 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 SNORA70F-201ENST00000384142 135 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 AL590762.2-201ENST00000395798 571 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 ARL4AP5-201ENST00000404372 599 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 ATG4AP1-201ENST00000416893 538 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 AC069213.2-201ENST00000420238 366 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 PTP4A1P1-201ENST00000420539 515 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 H2AFZP6-201ENST00000444403 394 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 MTCYBP14-201ENST00000457471 715 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 EIF2S2P5-201ENST00000457635 968 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 RN7SL354P-201ENST00000469282 294 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 AC096741.1-201ENST00000472250 846 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 OR52A4P-203ENST00000498233 1014 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 AC098799.1-201ENST00000504752 800 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 RN7SL652P-201ENST00000577769 300 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 AC009237.17-201ENST00000618111 748 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 AP003499.2-201ENST00000624100 483 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CTR9Q6PD62 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CTR9Q6PD62 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 Z98755.1-201ENST00000407015 1384 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 VN2R3P-201ENST00000422626 1412 ntBASIC5.63□□□□□ -1.51
CTR9Q6PD62 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CTR9Q6PD62 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CTR9Q6PD62 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.62□□□□□ -1.51
CTR9Q6PD62 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CTR9Q6PD62 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.62□□□□□ -1.51
CTR9Q6PD62 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CTR9Q6PD62 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.62□□□□□ -1.51
CTR9Q6PD62 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.62□□□□□ -1.51
CTR9Q6PD62 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CTR9Q6PD62 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CTR9Q6PD62 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.62□□□□□ -1.51
CTR9Q6PD62 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CTR9Q6PD62 RNA5SP443-201ENST00000363083 132 ntBASIC5.62□□□□□ -1.51
CTR9Q6PD62 AL591848.1-201ENST00000413092 322 ntBASIC5.62□□□□□ -1.51
CTR9Q6PD62 AC119751.6-201ENST00000416712 186 ntBASIC5.62□□□□□ -1.51
CTR9Q6PD62 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.62□□□□□ -1.51
CTR9Q6PD62 AC108463.1-201ENST00000450258 347 ntBASIC5.62□□□□□ -1.51
CTR9Q6PD62 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.62□□□□□ -1.51
CTR9Q6PD62 AC112206.1-201ENST00000468416 477 ntBASIC5.62□□□□□ -1.51
CTR9Q6PD62 RN7SL459P-201ENST00000481078 302 ntBASIC5.62□□□□□ -1.51
CTR9Q6PD62 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.62□□□□□ -1.51
CTR9Q6PD62 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.62□□□□□ -1.51
CTR9Q6PD62 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms