Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AL356967.1-201ENST00000406305 431 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AL691447.1-201ENST00000419456 387 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AC007064.3-201ENST00000422608 359 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 RPL12P28-201ENST00000430852 489 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 MRPL35P2-201ENST00000448009 511 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AC021660.1-201ENST00000465006 554 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 RPS27AP16-201ENST00000492222 470 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 RNU6-513P-201ENST00000516104 104 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 IGLVIV-65-201ENST00000517313 360 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 RPL23AP53-201ENST00000521854 457 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AL359219.2-201ENST00000555184 348 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 PARP1P2-201ENST00000556806 195 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AC136624.4-201ENST00000573044 370 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AC069061.3-201ENST00000582254 823 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AC020910.2-201ENST00000603635 610 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AL121890.3-201ENST00000618494 516 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AC016717.3-201ENST00000624730 554 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 AC233968.1-201ENST00000611212 1300 ntBASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.46□□□□□ -1.53
SHROOM1Q2M3G4 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
SHROOM1Q2M3G4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SHROOM1Q2M3G4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SHROOM1Q2M3G4 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.46□□□□□ -1.53
SHROOM1Q2M3G4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SHROOM1Q2M3G4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AC026951.1-201ENST00000559530 2459 ntBASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 RNA5SP187-201ENST00000384400 119 ntBASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 RNU6-178P-201ENST00000384631 104 ntBASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 MTND6P32-201ENST00000457611 483 ntBASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 HAUS1P1-201ENST00000505275 832 ntBASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 Y_RNA.719-201ENST00000517156 106 ntBASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AC105031.1-201ENST00000518550 476 ntBASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AL049830.4-201ENST00000555149 351 ntBASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AC023575.1-201ENST00000580510 358 ntBASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AC010503.3-201ENST00000594355 540 ntBASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AL133338.2-201ENST00000604292 736 ntBASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AC012409.3-201ENST00000611343 981 ntBASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 VN2R3P-201ENST00000422626 1412 ntBASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM1Q2M3G4 AC073136.1-201ENST00000449426 2884 ntBASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 AC002525.1-201ENST00000624392 1622 ntBASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 OR56B2P-202ENST00000641377 2453 ntBASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 E2F6P2-201ENST00000420708 748 ntBASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 AC004975.1-201ENST00000428733 208 ntBASIC5.45□□□□□ -1.54
SHROOM1Q2M3G4 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms