Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC007996.1-201ENST00000620414 2821 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH1Q08174 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDH1Q08174 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH1Q08174 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH1Q08174 AC021242.1-201ENST00000507315 2035 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH1Q08174 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
PCDH1Q08174 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
PCDH1Q08174 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH1Q08174 MKI67P1-201ENST00000604297 1460 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDH1Q08174 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDH1Q08174 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
PCDH1Q08174 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PCDH1Q08174 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDH1Q08174 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDH1Q08174 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PCDH1Q08174 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDH1Q08174 STAG3L4-201ENST00000352103 530 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 RNA5SP382-201ENST00000363355 112 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 RN7SKP191-201ENST00000364713 306 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 RNU1-46P-201ENST00000384425 164 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 AL136133.1-201ENST00000413694 376 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 AL596448.1-201ENST00000415024 392 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 RPS3AP9-201ENST00000417027 792 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 BX295541.1-201ENST00000417774 250 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 FABP7P1-201ENST00000424004 391 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDH1Q08174 AC008850.1-201ENST00000427546 362 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDH1Q08174 RPS7P5-201ENST00000441482 581 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDH1Q08174 SNRPBP1-201ENST00000443634 282 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDH1Q08174 PFN1P11-201ENST00000445829 389 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 SLAMF6P1-201ENST00000451067 602 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDH1Q08174 RPL23AP64-201ENST00000469465 435 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 OR7E99P-201ENST00000505750 922 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PCDH1Q08174 AF235103.2-201ENST00000525753 346 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.41□□□□□ -1.38
PCDH1Q08174 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.41□□□□□ -1.38
PCDH1Q08174 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDH1Q08174 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDH1Q08174 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDH1Q08174 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDH1Q08174 AC097467.4-201ENST00000605504 141 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 AC231657.1-201ENST00000624313 397 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 AC116563.2-201ENST00000624751 535 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDH1Q08174 VPS8-228ENST00000628962 207 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDH1Q08174 AC099654.15-201ENST00000639802 509 ntBASIC6.41□□□□□ -1.38
PCDH1Q08174 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDH1Q08174 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDH1Q08174 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDH1Q08174 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDH1Q08174 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDH1Q08174 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDH1Q08174 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDH1Q08174 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDH1Q08174 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDH1Q08174 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PCDH1Q08174 AC005332.9-201ENST00000620266 2921 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDH1Q08174 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDH1Q08174 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDH1Q08174 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
PCDH1Q08174 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
PCDH1Q08174 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
PCDH1Q08174 FARSBP1-201ENST00000435808 1778 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
PCDH1Q08174 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PCDH1Q08174 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDH1Q08174 RNU4-73P-201ENST00000363164 141 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 Y_RNA.356-201ENST00000365475 113 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 RNU6-533P-201ENST00000384144 107 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDH1Q08174 AL450338.1-201ENST00000407987 512 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 RNU4-64P-201ENST00000410795 131 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDH1Q08174 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDH1Q08174 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDH1Q08174 MTND4LP17-201ENST00000414607 293 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 AC004690.1-201ENST00000418216 328 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 SDCBPP3-201ENST00000419629 891 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDH1Q08174 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDH1Q08174 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDH1Q08174 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDH1Q08174 AL512605.1-202ENST00000441919 381 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 AC007677.1-201ENST00000445757 515 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 AL121578.2-201ENST00000448797 447 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 FABP3P2-201ENST00000453169 399 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 AC019084.1-201ENST00000457337 432 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 NF1P3-201ENST00000457709 450 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 RPL5P33-201ENST00000487833 905 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDH1Q08174 RPS26P24-201ENST00000497656 331 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms