Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.62□□□□□ -1.67
SCN1BQ07699 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SCN1BQ07699 AC100871.1-201ENST00000507871 1456 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCN1BQ07699 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SCN1BQ07699 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SCN1BQ07699 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SCN1BQ07699 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SCN1BQ07699 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.61□□□□□ -1.67
SCN1BQ07699 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SCN1BQ07699 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SCN1BQ07699 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
SCN1BQ07699 Z95327.2-201ENST00000414579 1873 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SCN1BQ07699 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SCN1BQ07699 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SCN1BQ07699 SNORD56.4-201ENST00000363883 71 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.61□□□□□ -1.67
SCN1BQ07699 RNU6-481P-201ENST00000384194 107 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SCN1BQ07699 AL035419.1-201ENST00000397037 564 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 SLC20A1P1-201ENST00000413906 956 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 RPL34P3-201ENST00000421454 338 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.61□□□□□ -1.67
SCN1BQ07699 ETF1P3-201ENST00000430422 1160 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.61□□□□□ -1.67
SCN1BQ07699 CDY14P-201ENST00000431260 1014 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.61□□□□□ -1.67
SCN1BQ07699 CDY12P-201ENST00000440679 1015 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 CDY13P-201ENST00000445813 1015 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 CDY23P-201ENST00000451661 1014 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 DNAJB5P1-201ENST00000454004 806 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SCN1BQ07699 NDUFA5P5-201ENST00000468361 342 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SCN1BQ07699 RPL21P47-201ENST00000483696 477 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 AC073073.1-201ENST00000493920 463 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.61□□□□□ -1.67
SCN1BQ07699 AC112518.2-201ENST00000508565 425 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 AC008565.1-201ENST00000509046 885 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.61□□□□□ -1.67
SCN1BQ07699 AC090568.1-201ENST00000509499 856 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 AC109464.1-201ENST00000511091 819 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 AC027308.1-201ENST00000517993 110 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.61□□□□□ -1.67
SCN1BQ07699 AC005363.1-201ENST00000530779 351 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 AC139103.1-201ENST00000534696 1030 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 PDCD5P1-201ENST00000543528 309 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 AL049872.1-201ENST00000556323 322 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.61□□□□□ -1.67
SCN1BQ07699 AP000769.2-201ENST00000602344 396 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.61□□□□□ -1.67
SCN1BQ07699 AL158211.2-201ENST00000607282 395 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 STMN1P1-201ENST00000617809 440 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 AP006248.2-201ENST00000623309 592 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SCN1BQ07699 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.61□□□□□ -1.67
SCN1BQ07699 MFSD8-213ENST00000641134 1327 ntBASIC4.61□□□□□ -1.67
SCN1BQ07699 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
SCN1BQ07699 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SCN1BQ07699 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.61□□□□□ -1.67
SCN1BQ07699 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SCN1BQ07699 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SCN1BQ07699 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SCN1BQ07699 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.6□□□□□ -1.67
SCN1BQ07699 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SCN1BQ07699 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SCN1BQ07699 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.6□□□□□ -1.67
SCN1BQ07699 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SCN1BQ07699 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SCN1BQ07699 ENSAP3-201ENST00000312710 333 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.6□□□□□ -1.67
SCN1BQ07699 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SCN1BQ07699 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SCN1BQ07699 GAPDHP42-201ENST00000406848 981 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 MTND2P15-201ENST00000418575 892 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 AC008173.1-201ENST00000418901 264 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.6□□□□□ -1.67
SCN1BQ07699 AC093422.3-201ENST00000428506 305 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 MTCO1P43-201ENST00000431831 488 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.6□□□□□ -1.67
SCN1BQ07699 OR6D1P-201ENST00000436165 939 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.6□□□□□ -1.67
SCN1BQ07699 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SCN1BQ07699 AL035407.2-201ENST00000454090 378 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SCN1BQ07699 CYCSP20-201ENST00000473154 315 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 RPL7P41-201ENST00000485823 957 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 SNORA26.10-201ENST00000516427 141 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 SCARNA16.4-201ENST00000516956 187 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 RN7SKP283-201ENST00000517197 270 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.6□□□□□ -1.67
SCN1BQ07699 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.6□□□□□ -1.67
SCN1BQ07699 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SCN1BQ07699 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.6□□□□□ -1.67
SCN1BQ07699 AC008562.1-201ENST00000521763 330 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.6□□□□□ -1.67
SCN1BQ07699 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.6□□□□□ -1.67
SCN1BQ07699 AC083923.1-201ENST00000523708 376 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms