Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 EOGT-210ENST00000615922 1931 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 MTCO1P11-201ENST00000429111 1528 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 KARSP3-201ENST00000571212 1504 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 RNU6-171P-201ENST00000384354 107 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 MIR93-201ENST00000385024 80 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AC093719.1-202ENST00000392735 373 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 SNORA11.3-201ENST00000408471 128 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 GJA6P-201ENST00000415117 1042 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 RPS26P47-201ENST00000427219 348 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 RPS20P1-201ENST00000434853 354 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 RHOT1P3-201ENST00000436571 331 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AC092647.3-201ENST00000443044 633 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AC000111.2-201ENST00000448200 210 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AC243772.1-201ENST00000451620 410 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 snoU13.20-201ENST00000459180 104 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AC026348.1-201ENST00000462549 1053 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 CYCSP28-201ENST00000534284 321 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 SLC25A36P1-201ENST00000590111 465 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AC006116.3-201ENST00000592968 361 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AC068790.5-201ENST00000602741 355 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 MEMO1P5-201ENST00000604810 406 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 COX6CP4-201ENST00000605798 228 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AC022467.1-201ENST00000614738 749 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 SNORA11.6-201ENST00000619030 128 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AC015804.1-201ENST00000622935 435 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AL121950.1-201ENST00000624993 2077 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 AL445437.1-201ENST00000623157 3087 ntBASIC3.62□□□□□ -1.83
HIST1H1AQ02539 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.62□□□□□ -1.83
HIST1H1AQ02539 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AL672167.1-203ENST00000641299 2975 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AL590763.1-201ENST00000398297 1545 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 RHOT1P2-201ENST00000366423 333 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 SNORA70-201ENST00000384436 135 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AP002530.1-201ENST00000405705 684 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AL080315.1-201ENST00000406055 466 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 PRPF38AP2-201ENST00000438179 851 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AL353748.1-201ENST00000440753 474 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AC109462.1-201ENST00000491087 368 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AC140172.1-201ENST00000502928 141 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AC018797.3-201ENST00000513388 1241 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 RNA5SP92-201ENST00000516437 110 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 RN7SKP5-201ENST00000517045 272 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 RN7SKP147-201ENST00000517154 244 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 IGLV2-28-201ENST00000520681 304 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 BUD31P1-201ENST00000521828 359 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 KCTD9P6-201ENST00000522306 950 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 DEFB109D-201ENST00000529497 240 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 HAUS8P1-201ENST00000549005 542 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AC008536.1-201ENST00000602872 669 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AL139395.1-201ENST00000603662 160 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AC074276.2-201ENST00000619891 348 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AC011815.3-201ENST00000624194 473 ntBASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.61□□□□□ -1.83
HIST1H1AQ02539 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 PHKBP1-201ENST00000450951 1951 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms