Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
H3F3AP84243 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
H3F3AP84243 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
H3F3AP84243 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.15□□□□□ -1.74
H3F3AP84243 SALL4P2-201ENST00000423288 2910 ntBASIC4.15□□□□□ -1.74
H3F3AP84243 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
H3F3AP84243 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.15□□□□□ -1.74
H3F3AP84243 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.15□□□□□ -1.74
H3F3AP84243 AL133268.1-201ENST00000405676 1401 ntBASIC4.15□□□□□ -1.74
H3F3AP84243 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
H3F3AP84243 LINC01109-201ENST00000603837 3081 ntBASIC4.15□□□□□ -1.75
H3F3AP84243 AC103591.2-201ENST00000265259 766 ntBASIC4.15□□□□□ -1.75
H3F3AP84243 RN7SKP103-201ENST00000363848 320 ntBASIC4.15□□□□□ -1.75
H3F3AP84243 RN7SKP224-201ENST00000364140 325 ntBASIC4.15□□□□□ -1.75
H3F3AP84243 RPS24P12-201ENST00000402084 394 ntBASIC4.15□□□□□ -1.75
H3F3AP84243 Z98745.1-201ENST00000402553 494 ntBASIC4.15□□□□□ -1.75
H3F3AP84243 AL049697.2-201ENST00000403708 294 ntBASIC4.15□□□□□ -1.75
H3F3AP84243 AL772161.1-201ENST00000439130 476 ntBASIC4.15□□□□□ -1.75
H3F3AP84243 ARL4AP3-201ENST00000441452 574 ntBASIC4.15□□□□□ -1.75
H3F3AP84243 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.15□□□□□ -1.75
H3F3AP84243 AC007016.1-201ENST00000512110 244 ntBASIC4.15□□□□□ -1.75
H3F3AP84243 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.15□□□□□ -1.75
H3F3AP84243 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.15□□□□□ -1.75
H3F3AP84243 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
H3F3AP84243 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.15□□□□□ -1.75
H3F3AP84243 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.15□□□□□ -1.75
H3F3AP84243 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.15□□□□□ -1.75
H3F3AP84243 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.15□□□□□ -1.75
H3F3AP84243 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.15□□□□□ -1.75
H3F3AP84243 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.15□□□□□ -1.75
H3F3AP84243 RPL26P30-202ENST00000602923 645 ntBASIC4.15□□□□□ -1.75
H3F3AP84243 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.15□□□□□ -1.75
H3F3AP84243 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.15□□□□□ -1.75
H3F3AP84243 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.15□□□□□ -1.75
H3F3AP84243 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
H3F3AP84243 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
H3F3AP84243 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
H3F3AP84243 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.15□□□□□ -1.75
H3F3AP84243 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.15□□□□□ -1.75
H3F3AP84243 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
H3F3AP84243 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
H3F3AP84243 ZNF137P-201ENST00000456718 1920 ntBASIC4.15□□□□□ -1.75
H3F3AP84243 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.15□□□□□ -1.75
H3F3AP84243 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
H3F3AP84243 MTCO1P22-201ENST00000604619 1360 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.14□□□□□ -1.75
H3F3AP84243 AL136164.3-201ENST00000624429 3978 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
H3F3AP84243 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
H3F3AP84243 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
H3F3AP84243 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.14□□□□□ -1.75
H3F3AP84243 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
H3F3AP84243 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
H3F3AP84243 AC087190.4-201ENST00000574616 8334 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.14□□□□□ -1.75
H3F3AP84243 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
H3F3AP84243 AC079741.1-201ENST00000321498 212 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
H3F3AP84243 SNORA70F-201ENST00000384142 135 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 RNA5SP397-201ENST00000391323 118 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
H3F3AP84243 SDHCP2-201ENST00000398565 501 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 MIR921-201ENST00000401133 56 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 AC004690.1-201ENST00000418216 328 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.14□□□□□ -1.75
H3F3AP84243 PTMAP3-201ENST00000447474 330 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
H3F3AP84243 ISCUP1-201ENST00000454451 448 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
H3F3AP84243 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 AC098799.3-201ENST00000506095 438 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.14□□□□□ -1.75
H3F3AP84243 RN7SKP34-201ENST00000516142 244 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.14□□□□□ -1.75
H3F3AP84243 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.14□□□□□ -1.75
H3F3AP84243 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.14□□□□□ -1.75
H3F3AP84243 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.14□□□□□ -1.75
H3F3AP84243 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
H3F3AP84243 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
H3F3AP84243 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.14□□□□□ -1.75
H3F3AP84243 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.14□□□□□ -1.75
H3F3AP84243 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.14□□□□□ -1.75
H3F3AP84243 AC209154.1-201ENST00000582156 337 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.14□□□□□ -1.75
H3F3AP84243 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.14□□□□□ -1.75
H3F3AP84243 BNIP3P32-201ENST00000600015 554 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 COX6CP4-201ENST00000605798 228 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 AL158062.1-201ENST00000619632 745 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 AC004232.3-201ENST00000622977 525 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.14□□□□□ -1.75
H3F3AP84243 U3.53-201ENST00000628922 216 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
H3F3AP84243 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
H3F3AP84243 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.14□□□□□ -1.75
H3F3AP84243 AC104118.1-201ENST00000607625 1589 ntBASIC4.14□□□□□ -1.75
H3F3AP84243 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
H3F3AP84243 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
H3F3AP84243 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms