Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 USP9YP9-201ENST00000429406 715 ntBASIC4.53□□□□□ -1.68
SKP1P63208 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.53□□□□□ -1.68
SKP1P63208 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.53□□□□□ -1.68
SKP1P63208 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.53□□□□□ -1.68
SKP1P63208 APOOP2-201ENST00000461561 539 ntBASIC4.53□□□□□ -1.68
SKP1P63208 RPS23P1-201ENST00000491662 432 ntBASIC4.53□□□□□ -1.68
SKP1P63208 AC020890.1-201ENST00000491837 504 ntBASIC4.53□□□□□ -1.68
SKP1P63208 HMGB3P16-201ENST00000508037 287 ntBASIC4.53□□□□□ -1.68
SKP1P63208 MORF4L1P3-201ENST00000525966 950 ntBASIC4.53□□□□□ -1.68
SKP1P63208 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.53□□□□□ -1.68
SKP1P63208 AC025423.2-201ENST00000537570 439 ntBASIC4.53□□□□□ -1.68
SKP1P63208 AP001880.2-201ENST00000538233 448 ntBASIC4.53□□□□□ -1.68
SKP1P63208 AC234775.3-201ENST00000564612 656 ntBASIC4.53□□□□□ -1.68
SKP1P63208 AC090312.1-201ENST00000580637 348 ntBASIC4.53□□□□□ -1.68
SKP1P63208 MIR4270-201ENST00000581799 70 ntBASIC4.53□□□□□ -1.68
SKP1P63208 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.53□□□□□ -1.68
SKP1P63208 FAM25E-202ENST00000608562 189 ntBASIC4.53□□□□□ -1.68
SKP1P63208 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.53□□□□□ -1.68
SKP1P63208 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SKP1P63208 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SKP1P63208 AL442639.1-201ENST00000625030 1899 ntBASIC4.53□□□□□ -1.68
SKP1P63208 BX005019.1-201ENST00000561881 1810 ntBASIC4.53□□□□□ -1.68
SKP1P63208 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SKP1P63208 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SKP1P63208 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SKP1P63208 AC132825.1-201ENST00000463573 2247 ntBASIC4.52□□□□□ -1.69
SKP1P63208 AL592182.3-201ENST00000642132 3304 ntBASIC4.52□□□□□ -1.69
SKP1P63208 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SKP1P63208 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SKP1P63208 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SKP1P63208 ATP5F1P2-201ENST00000398143 760 ntBASIC4.52□□□□□ -1.69
SKP1P63208 AP000580.1-201ENST00000404439 358 ntBASIC4.52□□□□□ -1.69
SKP1P63208 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.52□□□□□ -1.69
SKP1P63208 OR5M12P-201ENST00000423388 929 ntBASIC4.52□□□□□ -1.69
SKP1P63208 AC012519.1-201ENST00000424588 610 ntBASIC4.52□□□□□ -1.69
SKP1P63208 AL590762.4-201ENST00000425885 253 ntBASIC4.52□□□□□ -1.69
SKP1P63208 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.52□□□□□ -1.69
SKP1P63208 RPS26P47-201ENST00000427219 348 ntBASIC4.52□□□□□ -1.69
SKP1P63208 AC008072.1-201ENST00000434254 824 ntBASIC4.52□□□□□ -1.69
SKP1P63208 AC004938.1-201ENST00000438468 308 ntBASIC4.52□□□□□ -1.69
SKP1P63208 GEMIN8P3-201ENST00000445417 720 ntBASIC4.52□□□□□ -1.69
SKP1P63208 BTF3P6-201ENST00000448054 499 ntBASIC4.52□□□□□ -1.69
SKP1P63208 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.52□□□□□ -1.69
SKP1P63208 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.52□□□□□ -1.69
SKP1P63208 AC011005.3-201ENST00000491624 395 ntBASIC4.52□□□□□ -1.69
SKP1P63208 SCARNA22-201ENST00000503991 125 ntBASIC4.52□□□□□ -1.69
SKP1P63208 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.52□□□□□ -1.69
SKP1P63208 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.52□□□□□ -1.69
SKP1P63208 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.52□□□□□ -1.69
SKP1P63208 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.52□□□□□ -1.69
SKP1P63208 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.52□□□□□ -1.69
SKP1P63208 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.52□□□□□ -1.69
SKP1P63208 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SKP1P63208 PHKBP1-201ENST00000450951 1951 ntBASIC4.52□□□□□ -1.69
SKP1P63208 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SKP1P63208 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.52□□□□□ -1.69
SKP1P63208 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.52□□□□□ -1.69
SKP1P63208 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SKP1P63208 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SKP1P63208 DHX9P1-201ENST00000436565 3076 ntBASIC4.52□□□□□ -1.69
SKP1P63208 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SKP1P63208 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.52□□□□□ -1.69
SKP1P63208 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SKP1P63208 AL672167.1-204ENST00000641875 3017 ntBASIC4.51□□□□□ -1.69
SKP1P63208 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SKP1P63208 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SKP1P63208 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.51□□□□□ -1.69
SKP1P63208 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SKP1P63208 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SKP1P63208 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.51□□□□□ -1.69
SKP1P63208 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.51□□□□□ -1.69
SKP1P63208 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SKP1P63208 OR10J6P-201ENST00000289731 930 ntBASIC4.51□□□□□ -1.69
SKP1P63208 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SKP1P63208 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SKP1P63208 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.51□□□□□ -1.69
SKP1P63208 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.51□□□□□ -1.69
SKP1P63208 EIF4HP2-201ENST00000424380 563 ntBASIC4.51□□□□□ -1.69
SKP1P63208 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.51□□□□□ -1.69
SKP1P63208 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.51□□□□□ -1.69
SKP1P63208 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.51□□□□□ -1.69
SKP1P63208 AC104651.2-201ENST00000447549 528 ntBASIC4.51□□□□□ -1.69
SKP1P63208 EIF4A1P11-201ENST00000451239 222 ntBASIC4.51□□□□□ -1.69
SKP1P63208 AC010733.1-201ENST00000451515 401 ntBASIC4.51□□□□□ -1.69
SKP1P63208 CYCSP34-201ENST00000458172 304 ntBASIC4.51□□□□□ -1.69
SKP1P63208 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.51□□□□□ -1.69
SKP1P63208 AC090142.1-201ENST00000465776 462 ntBASIC4.51□□□□□ -1.69
SKP1P63208 AC037198.2-201ENST00000478845 733 ntBASIC4.51□□□□□ -1.69
SKP1P63208 MTCYBP19-201ENST00000517463 1124 ntBASIC4.51□□□□□ -1.69
SKP1P63208 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.51□□□□□ -1.69
SKP1P63208 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.51□□□□□ -1.69
SKP1P63208 AC125612.1-201ENST00000547580 377 ntBASIC4.51□□□□□ -1.69
SKP1P63208 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
SKP1P63208 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.51□□□□□ -1.69
SKP1P63208 MIR4480-201ENST00000582492 71 ntBASIC4.51□□□□□ -1.69
SKP1P63208 AC090948.2-201ENST00000607363 564 ntBASIC4.51□□□□□ -1.69
SKP1P63208 Mico1.1-201ENST00000611698 204 ntBASIC4.51□□□□□ -1.69
SKP1P63208 AL022401.1-201ENST00000619498 108 ntBASIC4.51□□□□□ -1.69
SKP1P63208 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.51□□□□□ -1.69
SKP1P63208 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms