Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.27□□□□□ -1.57
CLRN1P58418 C8orf59P1-201ENST00000429930 303 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 MED14P1-201ENST00000430517 648 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AL050321.1-201ENST00000432363 400 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLRN1P58418 MTND1P30-201ENST00000441241 901 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.27□□□□□ -1.57
CLRN1P58418 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.27□□□□□ -1.57
CLRN1P58418 KATNBL1P6-201ENST00000453433 915 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 SRRM1P2-201ENST00000464531 1192 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.27□□□□□ -1.57
CLRN1P58418 ACTG1P13-201ENST00000486987 1043 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.27□□□□□ -1.57
CLRN1P58418 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.27□□□□□ -1.57
CLRN1P58418 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.27□□□□□ -1.57
CLRN1P58418 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLRN1P58418 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.27□□□□□ -1.57
CLRN1P58418 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.27□□□□□ -1.57
CLRN1P58418 AC093225.1-201ENST00000506867 1408 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLRN1P58418 RN7SKP238-201ENST00000516483 249 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 RN7SKP183-201ENST00000517169 324 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 RN7SKP35-201ENST00000517210 151 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.27□□□□□ -1.57
CLRN1P58418 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.27□□□□□ -1.57
CLRN1P58418 SMARCE1P4-201ENST00000523647 241 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.27□□□□□ -1.57
CLRN1P58418 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.27□□□□□ -1.57
CLRN1P58418 GVINP1-202ENST00000531871 7271 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AP000873.5-201ENST00000533906 236 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.27□□□□□ -1.57
CLRN1P58418 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.27□□□□□ -1.57
CLRN1P58418 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.27□□□□□ -1.57
CLRN1P58418 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.27□□□□□ -1.57
CLRN1P58418 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.27□□□□□ -1.57
CLRN1P58418 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLRN1P58418 AL845552.1-201ENST00000556820 323 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 GTF2IP8-201ENST00000560687 584 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 OR1E3-201ENST00000575608 948 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.27□□□□□ -1.57
CLRN1P58418 AC022884.3-201ENST00000579571 248 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 MTATP6P3-201ENST00000581686 676 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.27□□□□□ -1.57
CLRN1P58418 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLRN1P58418 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.27□□□□□ -1.57
CLRN1P58418 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.27□□□□□ -1.57
CLRN1P58418 NTAN1P1-201ENST00000603150 646 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AP003973.1-201ENST00000604639 691 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AC128687.1-201ENST00000605304 619 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AC004948.1-201ENST00000609858 672 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 MIR6889-201ENST00000613185 59 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.27□□□□□ -1.57
CLRN1P58418 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLRN1P58418 AC245014.3-201ENST00000618589 347 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AC018755.4-201ENST00000619715 454 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AL356121.2-201ENST00000624715 780 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLRN1P58418 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
CLRN1P58418 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.27□□□□□ -1.57
CLRN1P58418 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.27□□□□□ -1.57
CLRN1P58418 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CLRN1P58418 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLRN1P58418 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.27□□□□□ -1.57
CLRN1P58418 MRRFP1-201ENST00000435941 1675 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLRN1P58418 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLRN1P58418 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.27□□□□□ -1.57
CLRN1P58418 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.26□□□□□ -1.57
CLRN1P58418 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CLRN1P58418 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CLRN1P58418 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CLRN1P58418 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CLRN1P58418 RNU4-21P-201ENST00000362802 126 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 RNA5SP514-201ENST00000363717 111 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 MIR217-201ENST00000384817 110 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AL161909.1-201ENST00000397390 712 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AL663109.1-201ENST00000411498 844 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 TPMTP3-201ENST00000411928 735 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 RPS15AP38-201ENST00000413110 372 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 OR51A3P-201ENST00000413596 924 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AL133325.1-201ENST00000421090 382 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 Z93242.1-201ENST00000427102 353 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AL022331.1-201ENST00000429025 477 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.26□□□□□ -1.57
CLRN1P58418 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.26□□□□□ -1.57
CLRN1P58418 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.26□□□□□ -1.57
CLRN1P58418 NMNAT1P2-201ENST00000435192 860 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 CYCSP11-201ENST00000436426 315 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 UBE2V1P5-201ENST00000440070 405 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 ATP5LP2-201ENST00000440646 311 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms