Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC245884.10-201ENST00000597355 337 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.36□□□□□ -1.55
HDAC4P56524 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.36□□□□□ -1.55
HDAC4P56524 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.36□□□□□ -1.55
HDAC4P56524 AC018926.1-201ENST00000616335 435 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 AC068880.4-201ENST00000623082 495 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 AC145207.9-201ENST00000623802 325 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.36□□□□□ -1.55
HDAC4P56524 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.36□□□□□ -1.55
HDAC4P56524 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.36□□□□□ -1.55
HDAC4P56524 AL359715.4-201ENST00000606629 1436 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HDAC4P56524 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.36□□□□□ -1.55
HDAC4P56524 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
HDAC4P56524 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HDAC4P56524 ZNF90P1-201ENST00000480493 1951 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
HDAC4P56524 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HDAC4P56524 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.36□□□□□ -1.55
HDAC4P56524 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HDAC4P56524 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HDAC4P56524 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.35□□□□□ -1.55
HDAC4P56524 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.35□□□□□ -1.55
HDAC4P56524 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HDAC4P56524 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HDAC4P56524 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.35□□□□□ -1.55
HDAC4P56524 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HDAC4P56524 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.35□□□□□ -1.55
HDAC4P56524 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HDAC4P56524 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
HDAC4P56524 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
HDAC4P56524 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HDAC4P56524 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HDAC4P56524 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.35□□□□□ -1.55
HDAC4P56524 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HDAC4P56524 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.35□□□□□ -1.55
HDAC4P56524 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HDAC4P56524 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.35□□□□□ -1.55
HDAC4P56524 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HDAC4P56524 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HDAC4P56524 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HDAC4P56524 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HDAC4P56524 RNU6-925P-201ENST00000384629 104 ntBASIC5.35□□□□□ -1.55
HDAC4P56524 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HDAC4P56524 U3.32-201ENST00000408116 212 ntBASIC5.35□□□□□ -1.55
HDAC4P56524 RN7SKP126-201ENST00000411143 300 ntBASIC5.35□□□□□ -1.55
HDAC4P56524 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.35□□□□□ -1.55
HDAC4P56524 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.35□□□□□ -1.55
HDAC4P56524 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.35□□□□□ -1.55
HDAC4P56524 CYCSP11-201ENST00000436426 315 ntBASIC5.35□□□□□ -1.55
HDAC4P56524 AP000936.3-201ENST00000438127 255 ntBASIC5.35□□□□□ -1.55
HDAC4P56524 RPL7AP61-201ENST00000443410 636 ntBASIC5.35□□□□□ -1.55
HDAC4P56524 AC096741.1-201ENST00000472250 846 ntBASIC5.35□□□□□ -1.55
HDAC4P56524 RN7SL30P-201ENST00000488416 306 ntBASIC5.35□□□□□ -1.55
HDAC4P56524 AC005412.2-201ENST00000492004 341 ntBASIC5.35□□□□□ -1.55
HDAC4P56524 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.35□□□□□ -1.55
HDAC4P56524 RNU6-334P-201ENST00000517072 102 ntBASIC5.35□□□□□ -1.55
HDAC4P56524 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.35□□□□□ -1.55
HDAC4P56524 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HDAC4P56524 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.35□□□□□ -1.55
HDAC4P56524 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.35□□□□□ -1.55
HDAC4P56524 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.35□□□□□ -1.55
HDAC4P56524 AC023158.1-201ENST00000561632 1025 ntBASIC5.35□□□□□ -1.55
HDAC4P56524 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.35□□□□□ -1.55
HDAC4P56524 AC023813.4-201ENST00000607580 580 ntBASIC5.35□□□□□ -1.55
HDAC4P56524 AF129408.1-201ENST00000608767 431 ntBASIC5.35□□□□□ -1.55
HDAC4P56524 MIR8084-201ENST00000614105 89 ntBASIC5.35□□□□□ -1.55
HDAC4P56524 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.35□□□□□ -1.55
HDAC4P56524 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
HDAC4P56524 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.35□□□□□ -1.55
HDAC4P56524 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HDAC4P56524 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
HDAC4P56524 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HDAC4P56524 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HDAC4P56524 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HDAC4P56524 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
HDAC4P56524 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HDAC4P56524 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HDAC4P56524 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HDAC4P56524 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HDAC4P56524 AC120338.1-201ENST00000625074 1541 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HDAC4P56524 MTCO1P4-201ENST00000520516 1409 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HDAC4P56524 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HDAC4P56524 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
HDAC4P56524 MIR223-201ENST00000385204 110 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 RPL21P67-201ENST00000402896 478 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HDAC4P56524 TATDN1P1-201ENST00000414123 891 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HDAC4P56524 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.34□□□□□ -1.55
HDAC4P56524 NDUFA5P10-201ENST00000432147 357 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 MTND2P2-201ENST00000434633 945 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 RNFT1P2-201ENST00000443064 757 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HDAC4P56524 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.34□□□□□ -1.55
HDAC4P56524 AC092647.2-201ENST00000452998 253 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms