Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU4-44P-201ENST00000363050 141 ntBASIC4.65□□□□□ -1.67
CDH11P55287 RNU4-7P-201ENST00000364758 141 ntBASIC4.65□□□□□ -1.67
CDH11P55287 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH11P55287 RNU6-1263P-201ENST00000384601 106 ntBASIC4.65□□□□□ -1.67
CDH11P55287 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CDH11P55287 RPL22P22-201ENST00000395439 379 ntBASIC4.65□□□□□ -1.67
CDH11P55287 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH11P55287 AL590806.1-201ENST00000415818 853 ntBASIC4.65□□□□□ -1.67
CDH11P55287 BX664727.1-201ENST00000416024 466 ntBASIC4.65□□□□□ -1.67
CDH11P55287 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH11P55287 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.65□□□□□ -1.67
CDH11P55287 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH11P55287 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDH11P55287 AC093166.2-201ENST00000455969 1017 ntBASIC4.65□□□□□ -1.67
CDH11P55287 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.65□□□□□ -1.67
CDH11P55287 TPT1P1-201ENST00000458495 518 ntBASIC4.65□□□□□ -1.67
CDH11P55287 AC005412.2-201ENST00000492004 341 ntBASIC4.65□□□□□ -1.67
CDH11P55287 AC093890.1-201ENST00000502554 540 ntBASIC4.65□□□□□ -1.67
CDH11P55287 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH11P55287 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH11P55287 AC097173.1-201ENST00000505862 819 ntBASIC4.65□□□□□ -1.67
CDH11P55287 AC133963.2-201ENST00000513686 578 ntBASIC4.65□□□□□ -1.67
CDH11P55287 RNA5SP303-201ENST00000516192 130 ntBASIC4.65□□□□□ -1.67
CDH11P55287 RNU6-415P-201ENST00000516252 97 ntBASIC4.65□□□□□ -1.67
CDH11P55287 IGHV3-63-201ENST00000518422 341 ntBASIC4.65□□□□□ -1.67
CDH11P55287 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH11P55287 AC138701.1-201ENST00000524329 714 ntBASIC4.65□□□□□ -1.67
CDH11P55287 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH11P55287 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
CDH11P55287 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH11P55287 EIF1P5-201ENST00000585002 234 ntBASIC4.65□□□□□ -1.67
CDH11P55287 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH11P55287 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH11P55287 AC068620.3-201ENST00000602749 560 ntBASIC4.65□□□□□ -1.67
CDH11P55287 AC069307.1-201ENST00000602820 447 ntBASIC4.65□□□□□ -1.67
CDH11P55287 AC119501.1-201ENST00000603646 475 ntBASIC4.65□□□□□ -1.67
CDH11P55287 AC034236.3-201ENST00000605999 461 ntBASIC4.65□□□□□ -1.67
CDH11P55287 AC026979.4-201ENST00000606555 645 ntBASIC4.65□□□□□ -1.67
CDH11P55287 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH11P55287 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDH11P55287 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH11P55287 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH11P55287 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH11P55287 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH11P55287 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CDH11P55287 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH11P55287 ZNF652P1-201ENST00000442420 1309 ntBASIC4.65□□□□□ -1.67
CDH11P55287 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH11P55287 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
CDH11P55287 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDH11P55287 SCARNA15-201ENST00000607520 4325 ntBASIC4.65□□□□□ -1.67
CDH11P55287 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CDH11P55287 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
CDH11P55287 CASC19-261ENST00000641853 1638 ntBASIC4.64□□□□□ -1.67
CDH11P55287 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH11P55287 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.64□□□□□ -1.67
CDH11P55287 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH11P55287 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH11P55287 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH11P55287 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH11P55287 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
CDH11P55287 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 MIR16-2-201ENST00000362117 81 ntBASIC4.64□□□□□ -1.67
CDH11P55287 U3.2-201ENST00000362981 210 ntBASIC4.64□□□□□ -1.67
CDH11P55287 RNU1-43P-201ENST00000365052 165 ntBASIC4.64□□□□□ -1.67
CDH11P55287 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH11P55287 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CDH11P55287 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
CDH11P55287 OR4K12P-201ENST00000406538 961 ntBASIC4.64□□□□□ -1.67
CDH11P55287 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.64□□□□□ -1.67
CDH11P55287 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH11P55287 RNU2-22P-201ENST00000411266 212 ntBASIC4.64□□□□□ -1.67
CDH11P55287 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH11P55287 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH11P55287 AC093655.2-201ENST00000425735 631 ntBASIC4.64□□□□□ -1.67
CDH11P55287 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH11P55287 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH11P55287 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH11P55287 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.64□□□□□ -1.67
CDH11P55287 AL591623.2-201ENST00000449978 222 ntBASIC4.64□□□□□ -1.67
CDH11P55287 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.64□□□□□ -1.67
CDH11P55287 TVP23BP2-201ENST00000455082 615 ntBASIC4.64□□□□□ -1.67
CDH11P55287 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH11P55287 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH11P55287 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH11P55287 AC116562.1-201ENST00000485355 781 ntBASIC4.64□□□□□ -1.67
CDH11P55287 AC073073.1-201ENST00000493920 463 ntBASIC4.64□□□□□ -1.67
CDH11P55287 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms